Vibrio metoecus: QYQ96_03165
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Entry
QYQ96_03165 CDS
T09673
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
vmt
Vibrio metoecus
Pathway
vmt03030
DNA replication
vmt03430
Mismatch repair
vmt03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
vmt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
QYQ96_03165 (dnaE)
03430 Mismatch repair
QYQ96_03165 (dnaE)
03440 Homologous recombination
QYQ96_03165 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vmt03032
]
QYQ96_03165 (dnaE)
03400 DNA repair and recombination proteins [BR:
vmt03400
]
QYQ96_03165 (dnaE)
Enzymes [BR:
vmt01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
QYQ96_03165 (dnaE)
DNA replication proteins [BR:
vmt03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
QYQ96_03165 (dnaE)
DNA repair and recombination proteins [BR:
vmt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
QYQ96_03165 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
DNA_pol_IIIA_C
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
WKY93703
LinkDB
All DBs
Position
1:680301..683780
Genome browser
AA seq
1159 aa
AA seq
DB search
MSDPKFIHLRVHSDFSMVDGLSKVPPLVKKVAAMGMPAMALTDFTNLCGLVKFYSTAHNC
GIKPIIGADFMLQSEEFGDELTKLTLLAKNNIGYKNLTLLISKAYLRGHVQHQPVLDKAW
LIDHAEGLIVLSGGKSGEVGRALLKGNQQQVEKCLEFYQTHFADHFYLELIRTGRADEES
YLHFALDVAEQYELPVVATNEVVFITEESFEAHEIRVAIHDGYTLEDPRRPKNYSPKQYL
RTEAEMCELFADIPEALENSVEIGKRCNVTVRLGEYFLPNFPTEGMAIEDFLVMKSREGL
EERLEFLFPNPEVRAQRRPEYDERLQIELDVINQMGFPGYFLIVMEFIQWSKDNDIPVGP
GRGSGAGSLVAYALKITDLDPLEYDLLFERFLNPERVSMPDFDVDFCMDKRDQVIDHVAE
MYGRDAVSQIITFGTMAAKAVIRDVGRVLGHPFGFVDRISKLVPPDPGMTLEKAFIAEPA
LQELYDADEEVKELIDKCRILEGCTRNAGKHAGGVVISPTAITDFAPIYCDAEGNFPVTQ
FDKNDVETAGLVKFDFLGLRTLTIIDWALGLVNPRLKKAGKPPVRIEAIPLDDARSFRNL
QDAKTTAVFQLESRGMKELIKRLQPDCFEDIIALVALFRPGPLQSGMVDNFIDRKHGREA
ISYPDEKWQHESLKEILEPTYGIILYQEQVMQIAQVLSGYTLGGADMLRRAMGKKKPEEM
AKQRAVFQEGAENNGVDGELAMKIFDLVEKFAGYGFNKSHSAAYALVSYQTLWLKTHYPA
EFMAAVMTADMDNTEKVVGLVDECKNMGLTVLPPDINSGLYRFNVDDNGAIVYGIGAIKG
VGEGPIEAILEARNKDGYFKDLFDFCARIDLKKVNKRVIEKLILAGALDRLGPHRAAMKA
SVDDAVRAASQHHQAEAFGQADMFGVLTDAPEEVEQKYTQVPEWPEKVRLEGERETLGLY
LTGHPVDEYLKELTKYTSCRLNEAAPTRRDQSLTVAGLVIAARVMTTKRGTRIGLMTLDD
RSGRMEVMLYSEALDRYAEWLEKDKILVVSGQVSFDDFNGGLKMSAREVMDLGSAREKFA
RGLSISILQSQIDQQFFERFSHILEPHRAGTVPVNVYYQRPDARARLTLGTEWRVTPSDT
LLDELKQLLGNDQVELEFN
NT seq
3480 nt
NT seq
+upstream
nt +downstream
nt
atgtcagacccaaagttcatccacttacgtgttcacagtgatttctcaatggtggatggt
ttgtccaaagtgccacctttggtgaaaaaagtggcggcaatgggcatgccagcaatggcg
ttgaccgatttcactaacttatgtggcttggttaagttttacagcaccgcgcacaactgc
ggaattaaaccgatcatcggtgccgacttcatgctgcaatcagaagagtttggtgatgaa
ctgaccaaactgacgctgcttgccaaaaataacatcggttataaaaacctcaccttattg
atttcaaaagcctatttacgaggtcatgttcaacatcaacctgtacttgataaagcttgg
ttgattgatcatgccgaagggctcatcgtactctctggtggcaagagtggtgaagtcggg
cgtgctttgctaaaaggtaaccaacaacaagttgagaagtgccttgagttttaccaaacc
cactttgctgaccacttctatttagagttaatccgcactggacgcgcagatgaagagagc
taccttcactttgcactggatgttgccgagcagtatgaactgccagtggtcgcaaccaat
gaagtggtgttcattacggaagaatcctttgaagcgcatgagatccgagtcgcgattcat
gatggttatacgctcgaagacccgcgtcgcccgaaaaattacagccctaaacaatatctg
cgcactgaggcggaaatgtgcgagctgtttgcggatattcccgaagcactggaaaacagc
gtggagattggtaagcgttgtaacgtaacggtgcgcttaggcgaatatttcctgcctaat
ttcccaaccgaagggatggcgatcgaagacttcctagtcatgaaatcccgtgaaggtctg
gaagagcggctcgaattccttttccctaatccagaagtccgtgcacagcgccgcccagaa
tatgatgagcgactgcaaatcgagctcgatgtaatcaaccagatgggtttccctggttac
ttcttgatcgtgatggagtttatccagtggtcaaaagataacgatattccggtaggaccg
gggcgggggtcgggtgccggttcgttagtggcgtatgcactgaaaatcaccgatcttgat
ccgctcgaatacgatctgctgttcgaacgtttcttaaacccagagcgggtatccatgccc
gactttgacgtcgatttctgtatggataagcgtgaccaagtgattgatcacgttgcggaa
atgtatggtcgtgatgcggtatcacaaatcattaccttcggtaccatggcggcgaaagcg
gtcattcgcgatgtgggtcgagtgcttggtcatccgttcggttttgtcgatcgcatttcc
aaattagtgccgcccgatccgggcatgacgcttgaaaaagcctttatcgccgagcctgca
ctgcaagagctgtatgacgcggatgaagaagtcaaagagctgatcgacaaatgtcgcatt
ctagaaggttgtactcgtaacgctggtaagcacgcaggtggcgtggtgatttcaccgact
gccatcactgactttgctccaatttactgtgatgcagaaggtaacttccccgttactcag
ttcgataagaacgatgtagaaaccgccggcctggtcaagtttgacttcttgggtctgcgc
accctcaccatcattgactgggcgttggggctggttaatccgcgtttgaaaaaagcaggc
aaaccaccggtacggattgaagcgatcccgctcgatgatgcgcgctctttccgtaaccta
caagatgctaaaaccaccgcggtattccagcttgaatcgcgtggtatgaaagagctgatt
aagcgactacagccagactgttttgaagacatcatcgctttggtggcgctgtttcgtccg
gggccgttgcaatcgggcatggtggataactttatcgaccgtaagcatggccgagaagcc
atctcttatccggatgaaaaatggcaacatgagtcacttaaagagattctagagccaact
tacggcatcatcctctatcaagaacaggtgatgcagattgcgcaggtgctttctggttat
accttgggtggggcagatatgttgcgccgtgcaatgggtaagaaaaaaccggaagagatg
gccaaacagcgcgccgtgttccaagaaggggctgaaaataacggcgttgatggtgagttg
gcgatgaaaatcttcgatctggtggaaaaattcgccggatacggatttaacaaatcgcac
tctgccgcttatgcgctggtttcctaccaaaccttatggttgaaaacccactatccagcc
gagttcatggcggcggtaatgaccgctgatatggacaacacggaaaaagtggttggcttg
gtggatgagtgtaaaaacatgggattgaccgtgttgccaccagacatcaactcgggtctt
tatcgctttaacgtggatgataacggtgcgattgtttacggcatcggtgctatcaaaggc
gtgggggaaggtccaattgaggccattcttgaagcacgtaacaaagacggttatttcaaa
gatttgtttgatttctgtgcgcgaattgatctgaaaaaggtcaacaagcgcgtgattgaa
aaactgattctggctggtgcgctagacagattagggccacatcgcgctgccatgaaggcc
tcggtcgatgatgcagtgcgtgcggcaagtcaacatcatcaggctgaagcatttggccaa
gcggatatgtttggtgtactcaccgatgcgccagaagaagttgagcagaaatacacgcaa
gtacctgagtggccggaaaaagtacgtttggaaggggagcgcgagacgcttgggctgtat
ctcaccggccatccagtcgatgaatacctgaaagagctgaccaaatacaccagttgccgc
ttgaatgaagccgcgccaacccggcgtgatcaatcgttaactgttgccggattagtgatt
gccgcgcgggtgatgaccaccaaacgcggtacgcgaattggcttaatgacgctggatgac
cgttcggggcgtatggaagtaatgctctactcagaagcattagatcggtatgcagaatgg
ttagaaaaagataaaattctggtggtttccggacaggtcagctttgatgacttcaatggc
ggacttaaaatgtcggcgcgcgaggtcatggacttgggcagcgcgcgtgaaaaatttgcc
cgcggtttatcgatctcgattttacagtcgcagattgatcaacaattttttgagcgtttt
agtcacatactggaacctcaccgcgcaggaaccgtacctgtcaatgtatactaccagcgc
cctgatgcgcgagcgcgcctgacgttaggcacagagtggcgagtcacgccaagcgataca
ttgttagacgaattaaagcagctacttggtaacgatcaggtagaactcgaatttaactaa
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