Vibrio metoecus: QYQ96_04890
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Entry
QYQ96_04890 CDS
T09673
Symbol
ihfB
Name
(GenBank) integration host factor subunit beta
KO
K05788
integration host factor subunit beta
Organism
vmt
Vibrio metoecus
Brite
KEGG Orthology (KO) [BR:
vmt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vmt03032
]
QYQ96_04890 (ihfB)
03036 Chromosome and associated proteins [BR:
vmt03036
]
QYQ96_04890 (ihfB)
03400 DNA repair and recombination proteins [BR:
vmt03400
]
QYQ96_04890 (ihfB)
DNA replication proteins [BR:
vmt03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
QYQ96_04890 (ihfB)
Chromosome and associated proteins [BR:
vmt03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
QYQ96_04890 (ihfB)
DNA repair and recombination proteins [BR:
vmt03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
QYQ96_04890 (ihfB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_1
DUF4777
HU-CCDC81_euk_2
Glycos_trans_3N
HU-DNA_bdg
HAAS
Ybfg_C
Motif
Other DBs
NCBI-ProteinID:
WKY94009
LinkDB
All DBs
Position
1:1028350..1028628
Genome browser
AA seq
92 aa
AA seq
DB search
MTKSELIERLCAEQTHLSAKEIEDAVKNILEHMASTLEAGERIEIRGFGSFSLHYREPRV
GRNPKTGDKVELEGKYVPHFKPGKELRERVNL
NT seq
279 nt
NT seq
+upstream
nt +downstream
nt
atgactaagtccgaattgattgaaagactctgtgcagaacaaacacatctatctgcaaaa
gagatcgaagatgcggtaaaaaatatccttgagcatatggcctctacgttagaagcgggt
gagcgcatcgagattcgtggtttcggtagcttttccttgcactatcgtgagcctcgtgtt
ggtcgcaatcctaaaactggcgataaggttgaactggaaggtaaatacgttccacacttt
aaacctggcaaagagttacgtgaacgcgttaacttgtaa
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integrated database retrieval system
