Vibrio metoecus: QYQ96_06020
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Entry
QYQ96_06020 CDS
T09673
Name
(GenBank) DEAD/DEAH box helicase
KO
K19789
DNA repair protein RadD
Organism
vmt
Vibrio metoecus
Brite
KEGG Orthology (KO) [BR:
vmt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vmt03400
]
QYQ96_06020
DNA repair and recombination proteins [BR:
vmt03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factor
QYQ96_06020
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Ortholog
Paralog
GFIT
Motif
Pfam:
ResIII
Helicase_C
DEAD
SWI2_SNF2
SLFN-g3_helicase
AAA_22
AAA
DZR
DUF7577
zf-tcix
AAA_16
MgtE_N
ERCC3_RAD25_C
T1R_D3-like
P-loop_SecA
Zn_ribbon_3
FAD_binding_4
Motif
Other DBs
NCBI-ProteinID:
WKY94400
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Position
1:complement(1294010..1295776)
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AA seq
588 aa
AA seq
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MYTLRPYQADSVKAVVHYFRQHSTPAVIVLPTGAGKSLVIAELARLARGRVLVLAHVKEL
VEQNHAKYEGYGLTGAIFSAGLGRKETDQQVVFASVQSVVRNLIEFQNQFSLLVIDECHR
VPDDKNSSYQKVIRHLLELNPGMKVLGLTATPYRLGMGWLYQYHTRGLVRSEESRFFRDC
IFELPIHYLLDEGFLTPAKLIDTPVMSYDFSQLKPANTGRYRESELDLVIEQSQRATPQI
IAQIIQFAKDRQGVMIFAATVRHAEEIYRLLPTEHAALVIGDTPTPERDRIIQAFKQQQI
KFLVNVSVLTTGFDAPHVDLIAILRPTESVSLYQQIIGRGLRLSEGKTDCLVLDYAGNQY
DLYQPEVGDPKPDSDSEIITIPCPACGFNNNFWGKLDANGFLLEHYGRRCQGFFTDEETG
EREHCGYRFRAKYCNECGADNDIAARICHECDATLVDPDKKLKEALNLKDALVFECTDMS
LKVHKDAKGKSQLQVTYHGQDAVQVHQFWSLGTPRQKQQFRDQFVRPHLADKHRPFEATT
PVKVVDHQHRFRPPLFVIARKSGRFWAIRDKVFADEFASSTESKPPSS
NT seq
1767 nt
NT seq
+upstream
nt +downstream
nt
atgtatacgttacgaccttatcaagcagactcagttaaagcggtagtacactattttcgc
cagcactcgaccccagccgtgattgttctgccaaccggtgcaggcaaaagcttagtgatt
gctgaactcgcccgcttagcacgggggcgagttttggtgttggcgcatgtcaaagaatta
gttgagcaaaaccatgccaaatatgaaggctatggcctgacgggagcgattttttcagcc
ggattaggccgtaaagagaccgatcagcaagtggtgtttgcctcagtacaatcggtagta
cgcaacttaatcgagttccaaaatcagttctctttattagtgattgatgaatgccaccgt
gtgccggatgacaaaaacagcagctaccaaaaagtgatccgccacttgctggaactcaat
ccaggaatgaaagtgcttgggctgacggctacaccctatcgactcgggatgggatggctc
tatcagtaccacacccgcggtttagtacgtagcgaagagtcccgttttttccgcgattgt
atttttgagctgccgattcattatctgctcgacgaaggtttcctcacccccgcaaaactg
attgatacgcccgtgatgagttacgacttttcacagcttaaaccggcgaatactgggcgc
tatcgtgaatcggaactcgatttagtgattgagcaatcacagcgtgccacaccgcaaatc
atcgcgcagatcattcagtttgctaaagatcgacaaggcgtgatgatttttgctgcgacc
gtgcgccacgccgaagagatttaccgcttactgcccaccgagcacgccgctttggtgatt
ggggataccccaacgccagaacgtgaccgcatcatccaagccttcaaacagcagcagata
aagtttttggtcaatgtgtccgtgctcaccacggggtttgatgcaccgcatgtcgatttg
attgcgattttacgccccaccgagtcggtcagtttatatcagcaaatcattggtcgaggg
ctgcgtctttctgaaggtaaaactgactgcttagtgctcgactacgcgggaaatcagtac
gacttgtatcaacctgaagtcggcgacccaaagccagattcagacagcgaaatcatcacc
attccctgccctgcttgcggttttaacaataacttctggggcaaactggatgcgaacggc
tttctgcttgaacattatggtcgccgctgccaaggcttctttactgatgaagaaacaggc
gagcgtgaacattgcggttaccgctttcgggctaaatactgcaatgaatgtggtgcggat
aacgacatcgcagcgcgcatctgccatgaatgtgatgccaccttggttgaccctgataaa
aagctcaaagaagcgctcaacctgaaagatgcactggtgtttgaatgtaccgacatgagc
ttgaaagttcataaagacgccaaggggaaaagtcagttgcaagtgacttaccacgggcaa
gatgcggtgcaagtacaccaattttggtcactaggcacgccacgccaaaagcagcaattt
cgcgatcaatttgtgcgcccacatttggcggataaacatcggcctttcgaggcaacaacg
ccggtgaaagtggtggatcatcaacaccgttttcgaccgcccttgtttgtgattgcccgt
aaatcgggacgtttttgggctatccgcgacaaagtatttgccgatgaatttgcctcttca
accgagagtaaaccgccatcgtcctag
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