Vibrio metoecus: QYQ96_06095
Help
Entry
QYQ96_06095 CDS
T09673
Name
(GenBank) cadherin domain-containing protein
Organism
vmt
Vibrio metoecus
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_CELSR2_9th
Cadherin_4
HemolysinCabind
Big_9
Cadherin_5
Big_11
Motif
Other DBs
NCBI-ProteinID:
WKY94243
LinkDB
All DBs
Position
1:1315927..1325694
Genome browser
AA seq
3255 aa
AA seq
DB search
MGIHALLSLTNLAANQLLVIDRNGNVTVINSGEPVPEGAIILDPNGSSLVPGEQAKPSAQ
LADAQGNTQPITNDIEQILTALEQGADPTALGEDLAPAAGGVQGSALTTAASIDRDGTEI
IAATQFDTAGFEALGLSRTQSLSLLNLLQAPTAPIIPVVPEEPDSPIVISTITGDSAAEG
SNNTFSVSLSGTTSAETTIVLTLASGTATKDVDFNGTSVIVVINGVSQTVPVNQDGTFQV
TVPTNTNSFSVQVSTADDGIYEGNETFTLSGKSAAQETAIIGTATIVDDNAPVIDDATVN
NVSESIANGTEVYDVQEARTGNDTDLDGEALQYTFVHSDNTRSTTSEDGAFSIDPATGKI
TVLDTTKVDYESATSIVLKVETTDGVHTDTADITLNLTNENDNDTVIEKTTDTFNYAEGT
AAGVTLGTVTATDADGASIEYSIAQEHNVYAADDVNKEHPFYQVDANGNVSLTEAGAKAF
TNDYESGLNTHTITVTATGKDGSGEDTTDTIVVTLNEQNIDDNAPKFEGTTDGEYSFNYD
ENSAADSVLGTVKATDADKETVTYSITSGNDNGWFAINATTGVITLTEAGAKAVANDFET
LANVHSLVVTATEDAGLGEVKHTDITVKLNEQNIDDNAPKFEGTTDGEYSFNYDENSAAD
SVLGTVKATDADTETVTYSITSGNDNGWFAINATTGVITLTAKGAEAAANDFETLANVHS
LVVTATEDAGLGEVKHTDITVKLNEQNIDDNAPKFEGTTDGEYSFNYDENSAADSVLGTV
KATDADTETVTYSITSGNDNGWFAINATTGVITLTEAGAKAVANDFETLANVHSLVVTAT
EDAGLGEVKHTDITVKLNEQNIDDNAPKFEGTTDGEYSFNYDENSAADSVLGTVKATDAD
TETVTYSITSGNDNGWFAINATTGVITLTAKGAEAAANDFETLANVHSLVVTATEDAGLG
EVKHTDITVKLNEQNIDDNAPKFEGTTDGEYSFNYDENSAADSVLGTVKATDADKETVTY
SITSGNDNGWFAINATTGVITLTEAGAKAVANDFETLANVHSLVVTATEDAGLGEVKHTD
ITVKLNEQNIDDNAPKFEGTTDGEYSFNYDENSAADSVLGTVKATDADKETVTYSITSGN
DNGWFAINATTGVITLTEAGAKAAANDFETLANVHSLVVTATEDAGLGEVKHTDITVKLN
EQNIDDNAPKFEGTTDGEYSFNYDENSAADSVLGTVKATDADKETVTYSITSGNDNGWFA
INATTGVITLTEAGAKAVANDFETLANVHSLVVTATEDAGLGEVKHTDITVKLNEQNIDD
NAPKFEGTTDGEYSFNYDENSAADSVLGTVKATDADKETVTYSITSGNDNGWFAINATTG
VITLTEAGAKAVANDFETLANVHSLVVTATEDAGLGEVKHTDITVKLNEQNIDDNAPKFE
GTTDGEYSFNYDENSAADSVLGTVKATDADTETVTYSITSGNDNGWFAINATTGVITLTE
AGAKAVANDFETLANVHSLVVTATEDAGLGEVKHTDITVKLNEQNIDDNAPKFEGTTDGE
YSFNYDENSAADSVLGTVKATDADKETVTYSITSGNDNGWFAINATTGVITLTEAGAKAV
ANDFELEANVHSLVVTATEDAGLGEVKHTDITVKLNEQNIDDNAPKFEGTTDGEYSFNYD
ENSAADSVLGTVKATDADKETVTYSITSGNDNGWFAINATTGVITLTEAGAKAAANDFET
LANVHSLVVTATEDAGLGEVKHTDITVKLNEQNIDDNAPKFEGTTDGEYSFNYDENSAAD
SVLGTVKATDADTETVTYSITSGNDNGWFAINATTGVITLTEAGAKAVANDFELEANVHS
LVVTATEDAGLGEVKHTDITVKLNEQNIDDNAPKFEGTTDGEYSFNYDENSAADSVLGTV
KATDADKETVTYSITSGNDNGWFAINATTGVITLTEAGAKAVANDFETLANVHSLVVTAT
EDAGLGEVKHTDITVKLNEQNIDEELSISGLNGANAELTVHESNLSDGSSPDHSALSKVG
SFSFTSIDGLASLVIAGHSFNVTELLALNSSDATISTPYGELTLTGFSGDLTGGTIQYEY
TLNDNVDNDSATNANGADYTDHISVTVIDVDGSQVTDSLDVKIVDDVSTALNDSGEVDIV
VDSFTVSGVVANWTSWSNGTNVTTFDGTNAPNGGGLDNDSGKDQIRWGQPASSYSSGYGF
IDNDSALNGEFALNQDIILGTFTHYNYPVYSGGAITSASMDVAFSVTDAHGVLTPVTLKL
NFDHNETPNTNDPEASKDIIKVGNTNVTFENAGALYTLQVIGFRIPGTNQIVTEIRTGEN
ATNSYELVVRVGPGEGYELPSTSGNVLANDVSGADVDMTVVGAACGNHVSSGVSGSVGSM
IAGLYGNLILLADGSYTYQVTANASSIPNDAIETFTYTMKDGDGDTSTALLSINVNRVTM
ADFNANQDHKVGLEDSEVAGNVLANDGSKNTSVDHFTVGNDATSHAVGSPVSLEQGELTL
NSDGSYTFKPADNWNGEVPVITYTTNTGKTSTLAITITPVDDATVTQPDHKSISEDTIAT
GNVLANDSDIDSTLSVTSFHVEGVNGVYTAGNTTYQLAEGTLVLKENGDYTFDPKDNWSG
SLPEITYTTNTGATGTLNIHVEAVADAPNLTINGYTSVAAINFEDARLNGSWDGVVANQI
HGLNTIGTWYTSNNSGKVEIGYENIYVSGGSSTNKVMEIEFNNGDKTLYTNIHAQAGRFY
ELEFDIAARAGSVNSSGLTIKLVPLNAYGVPIMAEAITLYDFNPTNADWLKDQKVTLPID
QTGEYRLLFEGDNADSYGAILDNLAFKVVDNMGYRGDFIKLSEISTSLNDTDTSETLSLK
LKGMPEGSILKDEQGHEATVGSNGEVDITGWDYSSLQIKTPSHGNFNITVEATATESSNQ
DSATTSATIPVTVLHPNEYVGRGGVDSFLLTKTHGDNANLNIALNAYYEGTTAIAPVTQQ
VAVTIDTDLVIHSGDSNDYIDLGISRADNTVYTGSSIPNFNNSTPSQSTLADSAFMKNDV
ITDHDGVLLQSVQSQIQPITDTVNLGSGNDTVYGGGGNLAAYGGAGNDTLIGGDGNDALR
GGADNDYLSGGRGNDVLRGDSGNDVLVGGLGSDILTGGSGEDLFKWVDGDLDNSKDRITD
FTIGQDKIDLSDLFSDETRTLDQLLNSHVIEITDKGQNSEIVINKGSTEHVTIQLDGVAA
SDLLSNLENIIHIKD
NT seq
9768 nt
NT seq
+upstream
nt +downstream
nt
atgggaattcatgctttgttgtctttaacgaatctggctgccaaccagttgcttgttatt
gatagaaatggaaatgttacggtaatcaattcaggtgaaccagtgccagaaggcgcgatc
atcctagatccaaacggtagtagcctagttcccggtgaacaagccaaacctagcgcgcaa
cttgcggatgctcaaggcaatacccaacctataaccaatgatattgagcagattttaacg
gctctagaacaaggcgccgatcctaccgcattaggggaggacctagccccagccgcaggc
ggagttcaaggctctgcactgacaacagccgcttcaattgaccgtgatggtacagaaatt
attgccgctacccaatttgatacagcaggctttgaagcactaggactttcaagaacgcaa
agtttgagtttgttgaatttgcttcaagctcccactgctcccattattccagttgtacca
gaagaacctgactctccaattgtaattagtacaatcacaggagatagtgcagcagaaggc
agcaacaataccttttccgtgagcctatcaggtactactagcgctgaaactacaatcgtg
ttgacactggctagtggtaccgctaccaaagatgtcgatttcaatggtacctcagtcatc
gttgtcattaatggtgtgagccagacagtgccagttaatcaagatggtactttccaagtg
actgttcctaccaatacaaacagctttagcgttcaagtctcgactgccgatgacggcatt
tacgaaggaaatgagaccttcacactgagcggaaaaagtgctgctcaagagacggctatt
atcggaacagcgaccatcgtggatgacaacgcgccggtcatcgacgacgcgaccgtgaat
aacgtgtcagagagcatcgcgaacggcaccgaagtgtacgacgtccaggaagcgcgcacc
ggcaacgacaccgacctcgatggtgaagcactgcaatacaccttcgtgcacagcgacaac
acccgcagcacgaccagtgaagacggcgcgttcagcatcgaccccgccaccggtaagatc
accgtgctcgataccaccaaggtggactacgagagtgccacgtccatcgtcctgaaagtc
gaaacgaccgacggcgtgcacaccgataccgcggacatcacactcaacctgacgaacgag
aacgacaacgacacggtcatcgagaaaacgacagatacgttcaactatgcggaaggcacg
gcggcgggcgtaacgctgggcacagtcacagcgaccgacgctgatggcgccagcatcgag
tacagcatcgcgcaagagcacaacgtgtacgcggcggatgatgtgaataaagagcatccg
ttctaccaggtggatgcgaacggtaatgtgagtctgaccgaggcgggtgcgaaagcgttc
accaacgactacgagtctggcctaaacacacacaccatcacggtgacggcgacgggcaaa
gacggttcgggcgaggacaccacagacaccatcgtggtgacgctcaacgagcagaacatt
gatgacaatgcgccgaagtttgaaggcaccacagacggtgagtacagcttcaactacgac
gagaacagcgcggcggacagcgtgctgggcacggtcaaggcgaccgatgcggataaagag
acggtgacctacagcatcacgtcgggcaacgacaacggctggtttgcgattaacgcgacc
acgggcgtgatcaccctgaccgaagcgggcgcgaaagcggtggccaacgactttgaaacg
ctggccaacgtgcacagcttggtggtgactgcgaccgaagatgcgggtctgggcgaggtg
aaacacaccgacatcacggtcaagctcaacgagcagaacattgatgacaatgcgccgaag
tttgaaggcaccacagacggtgagtacagcttcaactacgacgagaacagcgcggcggac
agcgtgctgggcacggtcaaggcgaccgatgcggatacagagacggtgacctacagcatc
acgtcgggcaacgacaacggctggtttgcgattaacgcgaccacgggcgtgatcaccctg
acggcgaaaggtgcagaggcggcggccaacgactttgaaacgctggccaacgtgcacagt
ctggtggtgaccgcgaccgaagatgcgggtctgggtgaggtgaaacacaccgacatcacg
gtcaagctcaacgagcagaacattgatgacaatgcgccgaagtttgaaggcaccacagac
ggtgagtacagcttcaactacgacgagaacagcgcggcggacagcgtgctgggcacggtc
aaggcgaccgatgcggatacagagacggtgacctacagcatcacgtcgggcaacgacaac
ggctggtttgcgattaacgcgaccacgggcgtgatcaccctgaccgaagcgggcgcgaaa
gcggtggccaacgactttgaaacgctggccaacgtgcacagtctggtggtgaccgcgacc
gaagatgcgggtctgggcgaggtgaaacacaccgacatcacggtcaagctcaacgagcag
aacattgatgacaatgcgccgaagtttgaaggcaccacagacggtgagtacagcttcaac
tacgacgagaacagcgcggcggacagcgtgctgggcacggtcaaggcgaccgatgcggat
acagagacggtgacctacagcatcacgtcgggcaacgacaacggctggtttgcgattaac
gcgaccacgggcgtgatcaccctgacggcgaaaggtgcagaggcggcggccaacgacttt
gaaacgctggccaacgtgcacagtctggtggtgaccgcgaccgaagatgcgggtctgggt
gaggtgaaacacaccgacatcacggtcaagctcaacgagcagaacattgatgacaatgcg
ccgaagtttgaaggcaccacagacggtgagtacagcttcaactacgacgagaacagcgcg
gcggacagcgtgctgggcacggtcaaggcgaccgatgcggataaagagacggtgacctac
agcatcacgtcgggtaacgacaacggctggtttgcgattaacgcgaccacgggcgtgatc
accctgaccgaagcgggcgcgaaagcggtggccaacgactttgaaacgctggccaacgtg
cacagtctggtggtgaccgcgaccgaagatgcgggtctgggcgaggtgaaacacaccgac
atcacggtcaagctcaacgagcagaacattgatgacaatgcgccgaagtttgaaggcacc
acagacggtgagtacagcttcaactacgacgagaacagcgcggcggacagcgtgctgggc
acggtcaaggcgaccgatgcggataaagagacggtgacctacagcatcacgtcgggcaac
gacaacggctggtttgcgattaacgcgaccacgggcgtgatcaccctgaccgaagcgggc
gcgaaagcggcggccaacgactttgaaacgctggccaacgtgcacagtctggtggtgacc
gcgaccgaagatgcgggtctgggcgaggtgaaacacaccgacatcacggtcaagctcaac
gagcagaacattgatgacaatgcgccgaagtttgaaggcaccacagacggtgagtacagc
ttcaactacgacgagaacagcgcggcggacagcgtgctgggcacggtcaaggcgaccgat
gcggataaagagacggtgacctacagcatcacgtcgggtaacgacaacggctggtttgcg
attaacgcgaccacgggcgtgatcaccctgaccgaagcgggcgcgaaagcggtggccaac
gactttgaaacgctggccaacgtgcacagtctggtggtgaccgcgaccgaagatgcgggt
ctgggcgaggtgaaacacaccgacatcacggtcaagctcaacgagcagaacattgatgac
aatgcgccgaagtttgaaggcaccacagacggtgagtacagcttcaactacgacgagaac
agcgcggcggacagcgtgctgggcacggtcaaggcgaccgatgcggataaagagacggtg
acctacagcatcacgtcgggcaacgacaacggctggtttgcgattaacgcgaccacgggc
gtgatcaccctgaccgaagcgggcgcgaaagcggtggccaacgactttgaaacgctggcc
aacgtgcacagtctggtggtgaccgcgaccgaagatgcgggtctgggcgaggtgaaacac
accgacatcacggtcaagctcaacgagcagaacattgatgacaatgcgccgaagtttgaa
ggcaccacagacggtgagtacagcttcaactacgacgagaacagcgcggcggacagcgtg
ctgggcacggtcaaggcgaccgatgcggatacagagacggtgacctacagcatcacgtcg
ggcaacgacaacggctggtttgcgattaacgcgaccacgggcgtgatcaccctgaccgaa
gcgggcgcgaaagcggtggccaacgactttgaaacgctggccaacgtgcacagcttggtg
gtgactgcgaccgaagatgcgggtctgggtgaggtgaaacacaccgacatcacggtcaag
ctcaacgagcagaacattgatgacaatgcgccgaagtttgaaggcaccacagacggtgag
tacagcttcaactacgacgagaacagcgcggcggacagcgtgctgggcacggtcaaggcg
accgatgcggataaagagacggtgacctacagcatcacgtcgggcaacgacaacggctgg
tttgcgattaacgcgaccacgggcgtgatcaccctgaccgaagcgggcgcgaaagcggtg
gccaacgactttgaattggaagccaacgtgcacagcttggtggtgactgcgaccgaagat
gcgggtctgggcgaggtgaaacacaccgacatcacggtcaagctcaacgagcagaacatt
gatgacaatgcgccgaagtttgaaggcaccacagacggtgagtacagcttcaactacgac
gagaacagcgcggcggacagcgtgctgggcacggtcaaggcgaccgatgcggataaagag
acggtgacctacagcatcacgtcgggcaacgacaacggctggtttgcgattaacgcgacc
acgggcgtgatcaccctgaccgaagcgggcgcgaaagcggcggcgaacgactttgaaacg
ctggccaacgtgcacagtctggtggtgaccgcgaccgaagatgcgggtctgggtgaggtg
aaacacaccgacatcacggtcaagctcaacgagcagaacattgatgacaatgcgccgaag
tttgaaggcaccacagacggtgagtacagcttcaactacgacgagaacagcgcggcggac
agcgtgctgggcacggtcaaggcgaccgatgcggatacagagacggtgacctacagcatc
acgtcgggcaacgacaacggctggtttgcgattaacgcgaccacgggcgtgatcaccctg
accgaagcgggcgcgaaagcggtggccaacgactttgaattggaagccaacgtgcacagt
ctggtggtgaccgcgaccgaagatgcgggtctgggcgaggtgaaacacaccgacatcacg
gtcaagctcaacgagcagaacattgatgacaatgcgccgaagtttgaaggcaccacagac
ggtgagtacagcttcaactacgacgagaacagcgcggcggacagcgtgctgggcacggtc
aaggcgaccgatgcggataaagagacggtgacctacagcatcacgtcgggcaacgacaac
ggctggtttgcgattaacgcgaccacgggcgtgatcaccctgaccgaagcgggcgcgaaa
gcggtggccaacgactttgaaacgctggccaacgtgcacagtctggtggtgaccgcgacc
gaagatgcgggtctgggcgaggtgaaacacaccgacatcacggtcaagctcaacgagcag
aacattgatgaagagcttagtatttcaggattgaatggggcgaatgctgaactaactgtt
catgaatcgaatctttcggatggttcgtcgccagatcactctgctcttagtaaagtaggg
agttttagctttacttctattgacggattagcgtctttagttattgctggtcatagtttc
aatgtgaccgaactgcttgcattgaactcctctgacgcaacgatttcaacgccttatggt
gaactaaccttgacggggttcagtggtgatctcactggtggaacgattcaatatgaatat
acgttgaatgacaatgtggataacgattcagccactaatgcaaatggcgcggactatacc
gatcatatctctgttactgtcattgatgtagatggtagtcaggtcactgatagcttagat
gttaaaattgtcgatgatgtttctacggctcttaatgatagtggagaagtagacattgtt
gttgacagtttcacggtatctggtgtggttgctaactggacatcatggagtaatggtacc
aacgtaaccacgtttgatggaaccaacgcaccaaatggtggcggtttagataatgacagc
ggtaaagaccaaatccgttggggtcaacccgccagttcatacagctctggctacggattt
atcgataacgatagtgctctaaatggtgagttcgccttaaaccaagatattattttaggt
acttttactcattacaattatcccgtttattcaggtggtgcgattaccagtgcgagtatg
gatgttgcgttttccgtgacagatgctcacggtgtgctcacacctgtgacgttgaaactg
aattttgatcacaatgaaacgccaaataccaatgatccggaagcatcaaaagacatcatc
aaagttggtaatactaatgtgacttttgagaatgcaggggctctctataccttgcaagtg
attggctttaggatcccaggcactaatcaaatcgtgacggaaattagaacgggtgaaaac
gcaacgaacagctatgaattagttgtacgtgttggccctggtgaagggtatgaattgcca
tctacatcaggcaacgtattagccaatgatgtttctggggcagatgtcgatatgacggtt
gtcggagctgcctgtggtaatcacgtgagctccggtgtttcaggcagcgttggctctatg
attgcgggtctgtatggtaatttgatcctactcgctgatggtagctacacataccaagtg
acagcgaatgcatcttcgattcctaatgatgcaatcgaaactttcacttacaccatgaaa
gatggcgatggtgatacttcaacggcgctactttctatcaatgtgaaccgagttacgatg
gcggatttcaatgctaaccaagatcataaggttggtttggaagactccgaggtagcgggt
aatgtgttagccaatgatggaagcaaaaacacctcagtggatcatttcacggtaggtaat
gatgccacttctcacgcagtgggtagccctgttagtttagagcaaggtgaactgacgctc
aattcggatggcagttacacatttaagccggcagataactggaatggtgaagttccagtt
attacctacacaaccaacactggaaaaacgagcacactagccatcaccatcacccctgtt
gatgatgctacggttactcaacctgatcataagtcgatctcagaagatactattgcgaca
ggtaatgtgctggcgaatgatagcgatatagacagcactctctctgtgaccagtttccat
gttgagggcgtcaatggggtttataccgctggcaatacgacgtatcagctggctgaaggt
actttagtgcttaaggaaaatggtgattatacctttgatccaaaagataactggagcggc
tcactgccagaaattacctataccaccaataccggagcaaccggaacactgaacatccat
gtcgaggcagtggctgatgcaccgaaccttactatcaacggctatacctctgttgctgca
atcaatttcgaggatgcgagattgaatggcagttgggatggcgtggttgcgaatcagatt
cacggtttgaacacgattggaacatggtataccagcaacaatagcgggaaagttgaaatc
ggttacgaaaatatctatgtatccggtggttcttcaacaaataaagttatggaaattgag
ttcaataatggtgacaagacgctgtataccaatattcatgctcaagcgggtcgcttttat
gagctagagtttgatattgcagctcgtgctggttctgtgaacagttcaggtttaaccatt
aagcttgttcctctgaacgcttacggtgttcctatcatggcagaagcaatcacgctttat
gatttcaatccaaccaatgcggactggttgaaagatcaaaaagtcacgcttcctatagat
caaactggggaatatcgtctgttgtttgaaggagataatgctgatagttatggggcgatt
ttagataatttggcatttaaagttgttgataatatgggctaccgcggagatttcattaaa
ctgagtgaaatttccacttcgctgaatgataccgatacctctgaaaccttgagtcttaaa
ttaaaaggaatgccagaaggttcgatattaaaagacgagcaaggccatgaagccacggtg
ggctcaaacggtgaggtagatattacaggatgggattacagcagcttacaaattaagacg
ccgagccatggtaatttcaatatcaccgttgaagctacggccactgaaagcagtaaccaa
gatagtgcaacgacgagtgcgaccattccggttacggtattacatccgaatgagtatgtg
ggacgtggcggtgttgattctttcttgttgaccaaaacccatggtgataatgctaacttg
aatattgcgctcaatgcttattatgaaggcactacagcgatcgcacctgtgacacaacaa
gtagccgtaacgattgatacggacttggtgatccattcaggagatagtaacgattacatc
gatttaggtattagtcgcgcggataatacggtttataccggtagctcaattcctaacttt
aataattctacgccgtcacaatctacactggcggatagcgcctttatgaaaaatgacgtg
attactgatcatgatggtgtgttattacaatcggtacaaagccaaattcaaccaatcacc
gatacggtgaatttaggtagtggtaacgataccgtttatggcggaggtggaaaccttgcc
gcttatggcggagcgggtaatgacactctgattggtggtgatggcaacgatgcactcaga
ggtggtgcggataatgactatctttcaggaggtcgtggtaatgacgttttacgtggtgat
tcaggtaacgacgttctggtcggtggccttggcagcgacatcctaactggtggctctggt
gaagatctctttaaatgggttgatggtgatttagataacagtaaagaccggattaccgac
tttacgattggccaagacaagattgatttaagcgatttgttctctgatgaaaccagaacg
ttagatcaactgcttaatagccatgttattgagattactgataaaggacaaaactcggaa
atcgttatcaacaagggatcgacagagcacgttacaattcagctcgatggcgtcgctgcg
agtgatttactctctaatttggaaaacataatccacataaaagattag
DBGET
integrated database retrieval system
