Vibrio metoecus: QYQ96_06950
Help
Entry
QYQ96_06950 CDS
T09673
Name
(GenBank) DEAD/DEAH box helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
vmt
Vibrio metoecus
Pathway
vmt03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
vmt00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
QYQ96_06950
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vmt03019
]
QYQ96_06950
Enzymes [BR:
vmt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
QYQ96_06950
Messenger RNA biogenesis [BR:
vmt03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
QYQ96_06950
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
SNF2-rel_dom
AAA_19
Flavi_DEAD
SMC_N
Motif
Other DBs
NCBI-ProteinID:
WKY92035
LinkDB
All DBs
Position
1:complement(1509893..1511089)
Genome browser
AA seq
398 aa
AA seq
DB search
MPFSQLGLSDVLTHTVAQLGYQTPTQIQTQAIPVILQGRDVIAAAQTGTGKTASFVLPIL
EKLRQGQTQRKKRVRALILVPTRELAMQVAEKVEQYGKATGLKGLAVFGGVDEQAQKQRL
IDGVDVLVATPGRLMDLYGQRAVYFEEIEMVVLDEADRMLDMGFIESINKIIDCLPNEVQ
FLLFSATLSRKVRELAKTAVNDPYEITIAANQASKSNISQWLITVDKDTKSALLSHLITE
QQWDQALIFIETKHGAAKLVTQLEKRGIQAEAFHSGRSQAIRAQLLEDFKAGKIKYLVAT
GVAARGIDIEQLSRVVNYDLPFPADEYVHRIGRTGRADAVGEAISFVSKDNFKNLCMIES
RLGHLIERRVVEGFEPKKPVPISILNYVPKHKRVTQEQ
NT seq
1197 nt
NT seq
+upstream
nt +downstream
nt
atgcctttttctcaacttggtttaagtgacgttctcactcacactgtggcgcaacttggt
taccaaactccaactcaaatccaaactcaagctatccctgttattttacaagggcgcgat
gttattgcggccgcgcaaaccggtaccggaaaaaccgctagctttgttctgccgatcctc
gaaaaactgcgccaaggacagacacagcggaaaaagcgtgttcgcgcattgattcttgtg
ccaacgcgagaactcgcgatgcaggtagcggaaaaagtggagcagtacggcaaagccaca
gggttaaaaggcctagccgtatttggtggtgtggatgaacaagcgcaaaagcaacgcttg
attgatggcgtcgatgtgctggtggcaacaccaggacgtttgatggatctctatgggcaa
cgcgctgtctatttcgaagaaatcgaaatggtggtactggatgaagccgatcgcatgttg
gatatgggctttattgaatccatcaataaaattattgattgcttgccgaatgaagtgcag
ttcttactgttttccgcgacactgtcacgtaaagtgcgtgaactggcgaaaacggcagtc
aatgatccttatgaaattactattgcggccaatcaggcatcaaaaagcaacatcagccaa
tggttgatcactgtggataaagacaccaaatcggcgttgctaagtcatttaatcactgaa
cagcagtgggatcaggcgctgatttttatcgaaactaagcatggtgcagccaaactggtt
acacagctagaaaagcgcgggattcaagcggaagcatttcacagcggccgtagccaagcg
attcgtgcacaattgcttgaggactttaaagcaggaaaaatcaaatacttggttgcaacc
ggtgttgcggcgcgcggcattgatattgagcaactttctcgtgtggttaactacgattta
cctttccctgccgatgaatatgtccaccgaattggccgaaccggacgtgcggatgcggtt
ggtgaagccatttcgtttgtgtcgaaagataactttaaaaacttgtgcatgattgaaagc
cgcttagggcatttgattgaacgccgtgtcgtggaaggttttgaacctaaaaaaccagtg
ccgatttcgattctgaactatgtgccaaagcataagcgtgtaacgcaagaacaataa
DBGET
integrated database retrieval system
