Vibrio metoecus: QYQ96_07760
Help
Entry
QYQ96_07760 CDS
T09673
Symbol
sbcB
Name
(GenBank) exodeoxyribonuclease I
KO
K01141
exodeoxyribonuclease I [EC:
3.1.11.1
]
Organism
vmt
Vibrio metoecus
Pathway
vmt03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
vmt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
QYQ96_07760 (sbcB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vmt03400
]
QYQ96_07760 (sbcB)
Enzymes [BR:
vmt01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.1 exodeoxyribonuclease I
QYQ96_07760 (sbcB)
DNA repair and recombination proteins [BR:
vmt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
QYQ96_07760 (sbcB)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
QYQ96_07760 (sbcB)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
QYQ96_07760 (sbcB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_X-T_C
RNase_T
Motif
Other DBs
NCBI-ProteinID:
WKY92191
LinkDB
All DBs
Position
1:1706693..1708117
Genome browser
AA seq
474 aa
AA seq
DB search
MQQEHQPTFFFFDYETWGVNPAKDRPSQFAGVRTDMDFNIIGEPLVIYCQLPNDYLPAPE
AALITGITPQKANSHGLSEPEFIARIHAEFSTPNTTSLGYNSIRFDDEVTRYTCYRNFID
PYAWSWQHGNSRWDLLDVIRACHALRPEGMEWPENEDGFTSFKLEHLSVANGIEHSNAHD
AMADVIATIELAKKLKAAQPKLFDYFFNMRHKRKLTELIDIVNQTPLMHVSGMLGRERQY
TSWIVPIAWHPTNQNAVIVVDLGKAPQPLLDLDAEALQARLYTRYEDLAPDELPIPVKLV
HLNKCPILAPAKTLTAENAEKIGIDREQCLAHLNVIRQHPEIREKLVSVFSQEREFAKEN
NVDSQLYDGFFSPADRAAMDIIRTTAPENLGNLDIKVADKRIEPLLFRYRARHYPHTLTD
AEQRRWAAHCREYFERNLESYMLNLENLVHEHQADPKKMAILKSVYHYVEKLAC
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atgcagcaagaacaccagcccacttttttctttttcgactacgagacttggggagtcaat
cccgccaaggatcgtccaagtcagtttgcgggtgttcgtaccgatatggatttcaacatt
attggtgagccgctggtcatttactgccaattacccaatgattatttacctgcgcctgaa
gcggcactgattaccggcattactccacaaaaggcgaatagccacggcttgtcagagcca
gaattcatcgcccgaatccacgcagagttttccacgccgaataccaccagcctaggctac
aacagcattcgttttgatgatgaagtgacgcgctacacctgttatcgcaactttatcgac
ccgtatgcatggagctggcaacacggcaattcacgctgggatctactggatgtgatccgc
gcttgtcatgctctgcgccctgaaggcatggaatggccagaaaatgaagatggctttacc
agcttcaaactagaacacctttctgttgccaacggcattgaacacagcaacgcacacgat
gccatggccgatgtgattgccacgattgaattggcgaaaaagctcaaagccgcgcagcct
aagttattcgactatttttttaacatgcgccacaaacgtaagctgactgagctgattgat
atcgttaaccaaaccccgctgatgcatgtttccggcatgcttggccgtgaacgccagtac
accagttggattgtgccgattgcttggcatccgaccaaccaaaatgcggtgattgtggtg
gatttgggtaaagcccctcagccactactggatctggatgcagaagcgttgcaagcgcgc
ctctatacacgctatgaagacttagcacccgatgaactgccgattcctgtgaagttagta
catctcaacaaatgcccaattctggctccggccaaaaccttaaccgcagagaatgccgaa
aagattggtattgatcgcgagcagtgtcttgcgcatttgaatgtgattcgccaacatcca
gaaattcgtgaaaagcttgtctcagtgttcagtcaagaacgtgagtttgccaaggaaaac
aatgtagatagccaattgtatgatggttttttctctcctgccgatcgcgcagcgatggat
atcattcgaaccactgctccggaaaacctcggaaaccttgacataaaagtggcagataaa
cggattgaaccacttctctttcgctaccgcgcacgccattatccacataccttaaccgat
gccgaacaacggcgttgggcggctcattgtcgtgagtatttcgagcgcaatctggaaagc
tatatgttgaatttggaaaatctggtgcatgaacatcaagctgatccaaagaaaatggcg
attttaaaatccgtctaccattacgtggaaaaactcgcttgctaa
DBGET
integrated database retrieval system
