Vibrio metoecus: QYQ96_09020
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Entry
QYQ96_09020 CDS
T09673
Symbol
truA
Name
(GenBank) tRNA pseudouridine(38-40) synthase TruA
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
vmt
Vibrio metoecus
Brite
KEGG Orthology (KO) [BR:
vmt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
vmt03016
]
QYQ96_09020 (truA)
Enzymes [BR:
vmt01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
QYQ96_09020 (truA)
Transfer RNA biogenesis [BR:
vmt03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
QYQ96_09020 (truA)
Prokaryotic type
QYQ96_09020 (truA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
RTC_insert
DUF2344
Motif
Other DBs
NCBI-ProteinID:
WKY92421
LinkDB
All DBs
Position
1:complement(1979679..1980473)
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AA seq
264 aa
AA seq
DB search
MRIALGIEYDGTHYYGWQRQREVKSVQEALEKALSKIANHPVEVQCAGRTDAGVHGTGQV
VHFDTTAERQMVAWTMGANANLPKDIAVRWASSVPDDFHARFSATARRYRYVIYNHVYRP
GILNSGVSHYHGELDVEKMQQAGQYLLGENDFTSFRAVHCQSRSPWRNLMHLNVTRHGRY
VVIDIKANAFVHHMVRNITGSLIAVGRGEQKPEWIQWLLEQKNRTLAAATAKAEGLYLVE
VDYPAHFGLPEMPIGPLFLPDNLN
NT seq
795 nt
NT seq
+upstream
nt +downstream
nt
atgagaattgcgttaggtattgagtatgacgggactcactactatggttggcagcgccaa
agagaagtcaaaagtgttcaagaagcgctagaaaaagcgctgagcaaaattgccaatcat
ccggttgaagtacaatgtgcgggtcgaacggatgccggcgtgcatggcactgggcaagtg
gtacattttgataccactgccgagcggcagatggtggcatggacgatgggagccaatgct
aatttgcccaaagatattgcagtgcgttgggccagctcagtaccagacgactttcatgca
cgattcagtgctacagcaagacgttatcgctatgtcatctacaaccatgtctaccgcccc
ggcattttgaattctggtgtcagccattatcacggtgaactggatgtcgaaaaaatgcag
caagctgggcaatatttgctcggcgaaaacgatttcacctcattccgcgcggtacattgt
caatcacgtagcccttggcgcaatctgatgcatttaaatgtcactcgtcacggccgctat
gtggtgattgacatcaaagccaatgcgttcgtgcatcatatggtgcgcaatatcaccggt
agtttgattgcggtgggacgtggtgagcagaagccagaatggattcaatggttacttgag
caaaaaaatcggactttggctgctgcgacggcaaaagcggaagggctttatttagtggaa
gtggattatccggcgcattttggattaccagaaatgccaattgggccacttttcttaccg
gataatttgaactaa
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integrated database retrieval system
