KEGG   Vibrio metoecus: QYQ96_09900
Entry
QYQ96_09900       CDS       T09673                                 
Name
(GenBank) HsdR family type I site-specific deoxyribonuclease
  KO
K01153  type I restriction enzyme, R subunit [EC:3.1.21.3]
Organism
vmt  Vibrio metoecus
Brite
KEGG Orthology (KO) [BR:vmt00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:vmt02048]
    QYQ96_09900
Enzymes [BR:vmt01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.3  type I site-specific deoxyribonuclease
     QYQ96_09900
Prokaryotic defense system [BR:vmt02048]
 Restriction and modification system (R-M system)
  Type I R-M system
   QYQ96_09900
SSDB
Motif
Pfam: T1RH-like_C SWI2_SNF2 HSDR_N T1R_D3-like ResIII Helicase_C AAA_22 DUF87 RNA_helicase
Other DBs
NCBI-ProteinID: WKY92585
LinkDB
Position
1:complement(2171106..2174378)
AA seq 1090 aa
MSHTFTEAKLEQAIISLLGEHHNTSGQPVYPHYVGSDVPRANEAEVLILDDLRHYLAEQY
KADGITSGEIETILRQVQTLPASDLYQSNKTFCHWLGNGFHFKRADHTQKDLHIQLLDIE
ALPQKLAAMFVDGIHTIEADNNRYRLVNQLEIEGIDQQKRKPDAILYVNGLPLVVFEFKS
AVREEAATTYNAWDQLHNRYRRDIPKLFVYNALCIISDGVNNKMGNVFSAYEFFYAWRKI
TGHESTEKEGINSLYTMLQGLFHPTRLLDVIKNFIFFPDTSKKEEKLCCRYPQYYAARKL
YYNIKKERKVVDASGNNMGGSGKGGTYFGATGCGKSYTMQFLVRLLMKSVDFESPTIVLI
TDRNDLDDQLSKQFCKATAYIGDDVIQPVSSRQDLRDKLAGRASGGVFLTTIHKFTEDIK
LLTDRCNVVCISDEAHRSQINLDLKITIDQEKGTIKKTYGFAKYLHDSLPNATYVGFTGT
PIDATLDVFGPEIDTYTMTEAVNDGITVRIVYEGRAAKVVLDNSKLEEIEKYYEECERLG
ANEHQIDESKKASANMNAILGDPDRIAELAKDFVTHYEKRVTEGSTIKGKAMFVCASREI
AYEFYKNVKVLRPEWFEEKQAIDGVELTEKDKEELMPLPMVNMVMTRGQDDEAEMYALLK
TKDYRKELDKQFKNAKSNFKIAIVVDMWLTGFDVPELDTIYIDKPLQKHNLIQTISRVNR
KFEEKDKGLVVDYIGIKSRMNQALAMCSKADKSNFEDIRQSLIEVRNHLHLLAQMFHTFD
SRDYFSGEPVKQLECLNQAAEFALQTKKIELRFMGLVKRLKAAYDICVGSEDITQDERER
IHFYIAVRSIVFKLTKGNAPDTAQMNKRVREMIAEALRAEGVEEIFTLGDDQAETIDIFD
DEYMDRINKIKLPNTKMQLLQKMLEKAISDFKKVNQLQGIDFSKRFKALVDQYNERKEND
VLNGEEFDNFSQMMTDMIYDIKTEMASFEEFGIDMEEKAFLDILVHMCEKYHFTYDDHRM
LELAKEMKIVVDDTAQYPDWSKRDDIKAKLKVDLILLLHRFGFPPVANDEVYKNVLEQAE
NFKKHSIAQR
NT seq 3273 nt   +upstreamnt  +downstreamnt
atgagccatacattcacagaagcaaaactggaacaggccatcatcagtttactgggtgag
caccacaacacctccggccagccggtgtacccgcattatgttggcagcgatgtaccgcgc
gcgaatgaggcggaagtgttgatcctcgatgatttgcgccattaccttgctgagcagtac
aaggcagacggcatcacgagcggcgagattgaaaccattctccgccaagtgcaaaccttg
cccgcgagtgatttgtaccagagcaacaaaaccttctgtcattggctgggtaatggcttc
cacttcaaacgtgcggatcacacgcaaaaagatcttcatattcaactattggatattgag
gcactgccccaaaaactggcggcaatgtttgttgatggcattcatactatcgaggctgac
aataaccgctaccgtttagtcaatcagctagaaatcgaagggatagatcagcaaaagcgc
aagccggatgcgattttgtacgtcaacggtttgccgctggtggtgtttgagtttaaatcc
gcggtacgtgaagaagccgccaccacctataatgcgtgggatcagttgcacaaccgctac
cgccgcgatattcccaagctgtttgtttacaacgcgctgtgtatcatcagtgatggtgtg
aacaataaaatgggcaacgtgttttccgcctacgaatttttctacgcatggcgcaaaatc
accggccatgaatcaactgagaaagagggcattaactccctctatacgatgctccaaggg
ctatttcacccaacccgcctgttggatgtgatcaaaaacttcatcttcttccctgatacc
agcaaaaaagaggagaagctgtgctgccgttacccgcagtattacgccgcccgtaagctt
tactacaacatcaaaaaagaacgcaaggtggtagatgccagcggcaacaacatgggtggc
agcggtaaaggcggtacttattttggcgcaacgggctgtggcaaaagctacaccatgcag
tttctggtgcgcctgttgatgaagtcggtcgattttgaaagcccaaccatagtgctgatc
accgatcgtaatgacttggatgatcaactttccaagcagttttgtaaggccaccgcctac
attggcgatgacgttattcaacctgtctccagccgtcaggatttgcgagataaattggca
gggcgcgccagtggcggcgtgttcctcaccaccattcacaagtttaccgaagacatcaaa
ctgctgacggaccgctgcaacgtggtctgtatttccgatgaagcgcaccgcagccagatt
aacctcgacctgaaaatcaccatcgatcaggaaaaaggcaccatcaagaaaacctatggt
tttgctaagtacctgcatgattctctgcccaatgccacctatgtgggttttaccggaacg
ccgattgacgccacgttggatgtgttcggccctgagattgatacctataccatgactgaa
gcagtcaatgacggcattacggtacgcattgtgtatgaaggccgcgcggccaaggtggtg
ctcgataacagcaaattggaagagatcgaaaaatactacgaggaatgcgaacggctcggg
gccaacgaacaccagattgatgagagtaagaaagcctcggccaatatgaacgcgattttg
ggtgaccctgaccgcattgccgagctggccaaagattttgtgactcactatgaaaagcgt
gttacggaaggctccacgattaaaggcaaggcgatgtttgtctgcgccagccgtgaaatt
gcctatgagttctacaaaaatgtgaaagtgctgcgccctgagtggttcgaggaaaagcag
gccattgatggcgtcgagctaaccgagaaagacaaagaagagttaatgccgctgccgatg
gtcaatatggtgatgactcgcggccaagatgacgaagccgagatgtacgccttgctcaag
accaaggactaccgcaaggagctggataagcagtttaagaacgcgaaatcgaatttcaaa
atcgccatcgtggtcgatatgtggctaaccggctttgatgtgccggagctggatacgatc
tacatcgacaagccgctacaaaagcacaacctgatccagaccatctcacgggttaaccgc
aaatttgaagagaaagacaaagggctggtggtcgattacatcggcattaaatcacgcatg
aatcaggcgctggcgatgtgctccaaagcggataaatccaactttgaggatatccgtcag
tcattgattgaggtgcgtaatcatcttcacttgctggcgcagatgtttcacacgttcgac
agtcgtgattacttcagtggcgaaccggttaagcagttggagtgcttaaaccaagctgcc
gagtttgcgctgcaaaccaagaagattgagctgcgttttatgggcttagtgaagcgccta
aaagcggcgtacgacatttgcgtaggcagtgaggacattacacaggatgaacgcgaacgc
attcatttctacattgcggtgcgctccatcgtgttcaagctgaccaaagggaatgccccc
gataccgcgcagatgaataagcgtgtgcgtgaaatgattgctgaggcattgcgtgccgaa
ggggttgaggaaatcttcacactgggcgatgaccaagcggaaaccatcgacatttttgat
gatgagtacatggaccgcatcaacaaaatcaaactgccgaacaccaagatgcagctgttg
caaaagatgctcgaaaaggccatcagcgattttaagaaggtgaaccagttgcaggggatc
gatttttcaaaacgtttcaaggcgctggtggatcaatacaacgagcgcaaagaaaacgat
gtgctcaacggtgaagagttcgacaactttagtcagatgatgaccgacatgatctacgac
atcaaaactgaaatggcttcgtttgaagagttcggcattgatatggaagagaaagccttc
ctcgatatcttggtgcacatgtgcgagaagtatcattttacttacgacgatcaccgaatg
cttgagttagccaaggagatgaagatcgtggtagatgacaccgcacaatatccagattgg
agcaaacgcgacgacatcaaagccaaattgaaagtcgatcttattcttttgttacaccgt
tttggattcccaccagtagcaaatgatgaggtatacaagaacgtgctagagcaggcggag
aattttaagaagcattccatcgcgcagcgctag

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