KEGG   Vibrio metoecus: QYQ96_10565
Entry
QYQ96_10565       CDS       T09673                                 
Symbol
srmB
Name
(GenBank) ATP-dependent RNA helicase SrmB
  KO
K05590  ATP-dependent RNA helicase SrmB [EC:5.6.2.7]
Organism
vmt  Vibrio metoecus
Brite
KEGG Orthology (KO) [BR:vmt00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:vmt03009]
    QYQ96_10565 (srmB)
Enzymes [BR:vmt01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     QYQ96_10565 (srmB)
Ribosome biogenesis [BR:vmt03009]
 Prokaryotic type
  rRNA helicases
   QYQ96_10565 (srmB)
SSDB
Motif
Pfam: DEAD Helicase_C ResIII AAA_19 Helicase_C_2 UvrD-helicase AAA_30 AAA_11
Other DBs
NCBI-ProteinID: WKY92705
LinkDB
Position
1:2325554..2326819
AA seq 421 aa
MIKTFADLELDPILLEAIEEMGFSRPTQVQAEAIPQALDGRDVLASAPTGTGKTAAFAIP
ALQYLLDFPRRKAGPARILILTPTRELAMQVAEQAQALAKNTRLNIFTITGGVQYQEHAD
ILATTQDIVVATPGRLLEYIDAERFDCRAIEWLILDEADRMLDMGFGPTVDRLSTECRWR
KQTLLFSATLEGRGVEGFTADLLKDPAHVDAEPPRRERKKISQWYHRADDMPHKVELLKK
ILTEQAERSIVFLKTRERLADLRAELEKAQIPCAWIQGEMPQDRRNNAITRFREGDVNIL
LATDVAARGIDVPDISHVINFDLPRSADVYLHRIGRTGRAGKKGIAISLVEAHDQPMMAR
VERYIKEEVKERFIDGLRPKHKKPVFKKKKKDSKKPADKGAVKKKATSKPKAAKKKAAKK
A
NT seq 1266 nt   +upstreamnt  +downstreamnt
gtgattaaaacctttgccgacctcgaactcgatccaatattgcttgaagcgatcgaagaa
atgggctttagccgcccaacccaagttcaggctgaagcaattccgcaagctctggatggt
cgtgatgtcttagcctctgcccctacaggtacaggtaaaacagccgcgtttgccattcca
gcgctgcaatacttgcttgatttcccacgccgtaaagcaggccctgcgcgaattctgatt
ttaacgccaacccgtgaactggcgatgcaagtggccgaacaagcgcaagcgctcgccaaa
aacacgcgtctgaacattttcaccattacaggcggtgtgcagtaccaagagcacgccgat
attctagccaccacccaagatatcgtggtcgccacacctggccgtttgctggaatatatt
gatgcagagcgttttgactgtcgtgcgattgaatggctgatcctcgatgaagcggaccgc
atgctggatatgggttttggcccaacggttgatcgcctctcgaccgagtgccgctggcgt
aaacaaaccctactgttctcggctactttagaaggccgtggtgtggaagggtttactgcc
gatctcttaaaagatcccgcccatgtcgatgccgaaccaccacgtcgtgagcgtaagaaa
atttcgcagtggtaccaccgcgccgatgacatgccacataaagtggaactgctgaaaaag
atcctgaccgagcaagccgaacgttcaatcgtattcttaaaaactcgtgagcgtctcgca
gacctgcgtgctgaactggaaaaagcccagatcccgtgtgcatggatccaaggggaaatg
ccacaagatcgtcgtaacaatgcgatcacacgtttccgtgaaggcgatgtgaatatccta
ctcgccactgacgtcgcggctcgtggtatcgacgtgccagacatcagccatgtgatcaac
tttgacttgccacgcagtgctgacgtttacctacaccgtatcggccgtactggacgagca
ggaaaaaaaggcatcgctatttcactggttgaagcacacgaccaaccgatgatggcgcgt
gttgagcgttacatcaaagaagaagtcaaagagcgttttattgatggcctacgccctaaa
cacaaaaaacctgtgtttaagaaaaagaaaaaagacagcaagaaaccggcagataaaggc
gcggtgaagaagaaagccaccagcaagccaaaagcggccaagaaaaaagccgcgaagaaa
gcctaa

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