Vibrio metoecus: QYQ96_10630
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Entry
QYQ96_10630 CDS
T09673
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
vmt
Vibrio metoecus
Pathway
vmt03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
vmt00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
QYQ96_10630 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vmt03019
]
QYQ96_10630 (pnp)
03016 Transfer RNA biogenesis [BR:
vmt03016
]
QYQ96_10630 (pnp)
Enzymes [BR:
vmt01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
QYQ96_10630 (pnp)
Messenger RNA biogenesis [BR:
vmt03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
QYQ96_10630 (pnp)
Transfer RNA biogenesis [BR:
vmt03016
]
Prokaryotic type
tRNA degradation factors
QYQ96_10630 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
RNase_PH_C
S1
KH_1
OB_RRP5_4th
S1_RRP5
KH_2
aRib
KH_SLS1_2
KH-I_KHDC4-BBP
DUF3016
Spt6_S1
Motif
Other DBs
NCBI-ProteinID:
WKY92718
LinkDB
All DBs
Position
1:complement(2340094..2342223)
Genome browser
AA seq
709 aa
AA seq
DB search
MFEKPVVKTFQYGNHTVTLETGVMARQATAAVMATMDDTAVFVSVVGKKEAVVGQDFFPL
TVNYQERTYAAGKIPGGFFKREGRPSEGETLTARLIDRPIRPLFPDGFTNEVQVIVTVVS
VNPDVQPDIISMIGTSAALAISGLPFNGPIGAARVGHIDGQLVLNPSEKELKQSRLDLVV
AGTDNAVLMVESEAQILTEEEMLAAVVFGHDQQQAVINAINEFAAEVATPAWEWVAPAEN
TELKAKVAALAETRLVEAYQITEKMARYARIHEISAEVSATLLAENEALDAKEIHTIFHD
LEKTVVRRSIIAGNPRIDGREKDMVRALDVRTGVLPRTHGSALFTRGETQALVTATLGTQ
RDAQIIDELTGEKKDHFLLHYNFPPYCVGETGFVGSPKRREIGHGRLAKRGIAAVMPSVD
EFPYTVRVVSEITESNGSSSMASVCGSSLALMDAGVPIKASVAGIAMGLVKEENDFVVLS
DILGDEDHLGDMDFKVAGTATGVTALQMDIKIEGITKEIMQIALNQAKGARLHILSVMDQ
AISAARSDISEFAPRIHTMKISVDKIKDVIGKGGAVIRQLTEETGTTIEIEDDGTIKIAA
TDGDQAKEAIRRIQEITAEVEVGVIYTGKVARLADFGAFVTILPGKDGLVHISQIADKRV
EKVSDYLTEGQEVQVKVLEIDRQGRVRLSMKEAVETSAEAAAEVAPQAE
NT seq
2130 nt
NT seq
+upstream
nt +downstream
nt
atgttcgaaaaaccagtagtaaaaacgtttcagtacggtaaccacaccgttactctagaa
accggtgttatggctcgccaagcaacggcagcagttatggcaaccatggacgacaccgca
gtgttcgtcagcgtcgttggtaagaaagaagccgttgtgggtcaagatttcttcccactg
actgtaaactaccaagagcgtacatacgcagcaggtaaaatccctggtggtttctttaag
cgcgaaggtcgtccttctgaaggcgaaacgttgacagcacgtctgatcgaccgcccaatt
cgcccactgttccctgatggtttcactaacgaagtacaagtaattgtcacggtcgtttct
gttaacccagatgtacaacctgacatcatttcgatgatcggtacttctgcagcgctggcg
atttctggccttccattcaatggcccaatcggtgcagctcgtgtcggccacattgatggt
caattggttctgaacccaagtgaaaaagagctgaaacagtctcgtctggatctagtggtt
gcgggtactgacaacgcagttctgatggttgaatcagaagcgcaaattctgactgaagaa
gagatgctggcagcggttgtgtttggtcacgatcaacaacaagccgttatcaatgcaatc
aacgaattcgcagctgaagtggcaactccagcatgggaatgggttgctccagctgaaaac
actgagctgaaagcgaaagtggctgctctagcagaaacacgtctggttgaagcgtaccaa
atcactgagaagatggcgcgttatgctcgcatccatgaaatcagtgctgaagtgagcgct
actctgctggctgaaaacgaagcgttggatgcaaaagaaatccacacgattttccacgat
ttggaaaaaaccgttgtacgtcgcagcatcatcgcgggtaacccacgtattgatggccgt
gaaaaagacatggttcgtgctctggacgtacgtactggcgttctgccacgtactcacggt
tctgcactattcactcgtggtgaaacccaggctctagtaacagcaactctgggtactcaa
cgtgacgcacagatcatcgatgagctgactggcgagaagaaagatcacttcctactgcac
tataacttccctccatactgtgtaggcgaaactggctttgttggttcacctaagcgccgc
gaaatcggtcatggtcgtttggcgaagcgtggtattgcagcggttatgccttcagtagac
gaattcccgtacacagtacgtgtggtttctgagatcactgaatcgaacggttcatcttca
atggcttctgtgtgtggttcatctcttgctctaatggatgcaggtgttccaatcaaggct
tctgttgcgggtatcgcaatgggtctggtgaaagaagaaaatgatttcgtcgttctgtct
gacattctgggtgatgaagaccacctaggcgacatggactttaaagtagcgggtaccgca
acaggtgtgactgcactgcagatggacatcaagatcgaaggtatcactaaagagatcatg
caaattgcactgaaccaagcaaaaggtgctcgtctgcacattctgtcagtgatggatcaa
gctatctctgctgcacgtagcgatatctctgaatttgcgccacgtatccacaccatgaaa
atcagtgtagataagatcaaagacgtgatcggtaaaggcggtgcggtaattcgtcagctg
actgaagaaacgggtactacgatcgagatcgaagatgacggtactatcaagatcgcagca
actgacggtgatcaagcgaaagaagcgattcgtcgtattcaagaaatcactgcagaagtt
gaagtgggcgttatctacaccggtaaagtggctcgcttggcagacttcggtgcgtttgta
acgattcttccaggtaaagatggtctagtacacatctctcaaattgctgacaagcgtgta
gagaaagtgtctgattacctgactgaaggtcaagaagttcaagttaaagtgcttgaaatt
gaccgccaaggccgtgttcgtctaagtatgaaagaagcggttgaaacgtcagcagaagct
gcagctgaagttgcaccacaagcggaataa
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