Vibrio metoecus: QYQ96_10640
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Entry
QYQ96_10640 CDS
T09673
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
vmt
Vibrio metoecus
Brite
KEGG Orthology (KO) [BR:
vmt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
vmt03016
]
QYQ96_10640 (truB)
Enzymes [BR:
vmt01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
QYQ96_10640 (truB)
Transfer RNA biogenesis [BR:
vmt03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
QYQ96_10640 (truB)
Prokaryotic type
QYQ96_10640 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Pus10_C
Motif
Other DBs
NCBI-ProteinID:
WKY92720
LinkDB
All DBs
Position
1:complement(2342935..2343873)
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AA seq
312 aa
AA seq
DB search
MARRRKGRVIHGVILLDKPTGISSNDALQKVKRLYGAEKAGHTGALDPLATGMLPICLGE
ATKFSQFLLDSDKRYRVIAKLGERTDTSDSDGQVVQTRPVNVERDTLLACIEKFRGETDQ
VPSMFSALKYQGRPLYEYARQGIEVPREARKITVYEIELHRFESDEVEMEVHCSKGTYIR
TIVDDLGEMLGCGAHVTMLRRVGVANYPYERMVTLEQLNALVEQAHRDEKTVSDVLDPLL
LPMDTAVEALPEVNVIPELMQLVQHGQAVQVSGAPTDGMVRITGGEQKLFLGVGEIDDNG
KVAPKRLVVYGE
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atggctcgtcgacgtaaaggtcgggttatccacggtgtgattctgttggataagccgaca
ggcatttcctccaacgacgctttgcaaaaagttaaacgtctctatggtgctgaaaaagct
ggccataccggcgcacttgaccctctggcgaccggcatgctgccgatctgtctcggtgaa
gccactaagttttctcagtttctgcttgattccgataaacgttatcgtgtgatcgcaaaa
ttgggcgaacgtaccgatacgtcagactctgacggtcaagtggtgcaaacgcgccctgtc
aacgtggagcgcgatacacttcttgcgtgtattgaaaagtttcgtggtgagaccgatcaa
gtcccatccatgttctccgcgttgaaatatcaaggtcgtccactctacgaatacgctcgt
cagggtattgaagtgccgcgtgaagcacgcaagatcaccgtgtatgagattgagctgcat
cgctttgaaagtgatgaagtggagatggaagtgcactgctcaaaaggcacttacatccgt
accatcgtcgatgatctgggtgaaatgctgggttgtggtgctcatgtcacgatgctgcgt
cgtgttggtgttgctaactatccgtatgaacggatggtgacactagagcagctcaatgca
ttagttgaacaagcccatcgtgatgaaaagacggtttctgacgttctcgatccgctatta
ctgccgatggataccgccgtggaagcgttaccagaagtcaatgtgatcccagagctgatg
cagcttgtgcagcatggacaagcggtgcaggtttctggtgcgccaaccgatggtatggtg
cgcatcactggtggtgaacagaagctgtttcttggcgttggtgagattgacgataacggc
aaggtagcgccgaaacgcttagtcgtttacggcgaataa
DBGET
integrated database retrieval system
