Vibrio metoecus: QYQ96_12170
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Entry
QYQ96_12170 CDS
T09673
Symbol
orn
Name
(GenBank) oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
vmt
Vibrio metoecus
Pathway
vmt03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
vmt00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
QYQ96_12170 (orn)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vmt03019
]
QYQ96_12170 (orn)
03009 Ribosome biogenesis [BR:
vmt03009
]
QYQ96_12170 (orn)
Messenger RNA biogenesis [BR:
vmt03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
QYQ96_12170 (orn)
Ribosome biogenesis [BR:
vmt03009
]
Eukaryotic type
Pre-60S particles
RNases
QYQ96_12170 (orn)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Motif
Other DBs
NCBI-ProteinID:
WKY92966
LinkDB
All DBs
Position
1:complement(2655981..2656526)
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AA seq
181 aa
AA seq
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MSFSDQNLIWIDLEMTGLDPETHKIIEMATIVTDSELNILAEGPVIAIHQPESELAKMDE
WCTTTHTGSGLVARVRASQVSEEQAIDQTLAFLKQWVPEGKSPICGNSIGQDRRFLYKHM
PRLEAYFHYRYIDVSTIKELTRRWQPEVLKEFSKTGSHLALDDIRESIAELQFYRKSVFK
I
NT seq
546 nt
NT seq
+upstream
nt +downstream
nt
atgtcttttagcgaccagaatctgatttggattgatttagagatgacgggactcgatcct
gaaacgcacaaaatcattgaaatggcgaccattgttaccgacagtgagttaaacattcta
gccgaagggcctgtgatcgcgattcatcaaccagaatcagaactcgccaaaatggatgag
tggtgcaccactacgcacacgggcagcggtttggttgcacgagtgcgagccagccaagtc
agcgaagaacaagcgatcgatcaaaccctggcatttttaaaacaatgggttccggaaggg
aaatcgccaatttgtggtaacagcattggccaagatcgacgtttcctttacaagcatatg
ccgcgcttggaagcctatttccattatcgctatatcgatgtcagcaccattaaagagctg
actcgtcgttggcaacctgaagtgttaaaagagttcagcaaaacaggtagccatcttgcc
ttagacgatattcgagagtcgatcgctgagctccagttctatcgtaagtcagtattcaag
atttaa
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