Vibrio metoecus: QYQ96_12725
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Entry
QYQ96_12725 CDS
T09673
Symbol
mutM
Name
(GenBank) bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
vmt
Vibrio metoecus
Pathway
vmt03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
vmt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
QYQ96_12725 (mutM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vmt03400
]
QYQ96_12725 (mutM)
Enzymes [BR:
vmt01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
QYQ96_12725 (mutM)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
QYQ96_12725 (mutM)
DNA repair and recombination proteins [BR:
vmt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
QYQ96_12725 (mutM)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
Auto_anti-p27
COOH-NH2_lig
Zn_ribbon_6
HscB_4_cys
Motif
Other DBs
NCBI-ProteinID:
WKY93063
LinkDB
All DBs
Position
1:complement(2780084..2780893)
Genome browser
AA seq
269 aa
AA seq
DB search
MPELPEVEVSRLGISPHLVGGTIQSLVLRTPKLRWPIPQELKQLEGQTILAIHRRAKYLI
IETAVGSAIVHLGMSGSLRILDGDFPAAKHDHVDLVMTSGKRLRYNDPRRFGAWLWCAPD
ESHEVLGRLGPEPLTEAFNAEYMMDKARNKRIAVKAFIMDNAAVVGVGNIYANESLFTSR
IHPLRPAHSLSLEEWQILVANIKQVLQVAIKQGGTTLKDFTQSDGKPGYFAQELQVYGKA
KQPCPNCGEPLCEQKIAQRNTFFCPQCQH
NT seq
810 nt
NT seq
+upstream
nt +downstream
nt
atgccggaattacctgaagttgaagtcagtcgtttagggatctcgccacatttggtcggc
ggcaccattcaatccttagtgttacgtacgcccaagttgcgctggccgattcctcaagag
ctgaaacagcttgaagggcaaactattctcgcgattcatcgtcgagccaagtatctgatt
attgaaacagccgtcggcagtgcgattgtgcatttaggtatgtccggttcactgcgtatt
ttggatggcgattttcctgctgcgaaacacgatcatgtggatctggtaatgaccagtggc
aaacggctgcgctataacgatccgcgccgcttcggggcttggttatggtgtgcgccagat
gaaagccacgaagtgctcgggcgtttggggcctgagccgctgaccgaagcctttaacgct
gaatatatgatggacaaagcgcgcaacaaacgcatcgcagtcaaagcttttatcatggac
aacgccgcagtcgtgggtgtgggtaatatctacgccaatgaatcgctgtttacatcacgc
atccatccactgcgccccgctcattcgctgagtttagaggagtggcaaatcttagtagcg
aacatcaaacaagtgctgcaagtggcgattaagcaaggcggcaccacgctgaaagacttt
acccaaagcgatggtaagccgggctatttcgcgcaagagctgcaagtgtatggcaaagcc
aaacagccttgccccaattgtggagagccgctttgcgagcagaaaattgctcagcgcaat
acctttttctgcccgcagtgccagcattga
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