Vibrio metoecus: QYQ96_12875
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Entry
QYQ96_12875 CDS
T09673
Symbol
uvrD
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
vmt
Vibrio metoecus
Pathway
vmt03420
Nucleotide excision repair
vmt03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
vmt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
QYQ96_12875 (uvrD)
03430 Mismatch repair
QYQ96_12875 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vmt03400
]
QYQ96_12875 (uvrD)
Enzymes [BR:
vmt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
QYQ96_12875 (uvrD)
DNA repair and recombination proteins [BR:
vmt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
QYQ96_12875 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
QYQ96_12875 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
Viral_helicase1
AAA_12
AAA_11
Speriolin_C
Motif
Other DBs
NCBI-ProteinID:
WKY93092
LinkDB
All DBs
Position
1:complement(2811575..2813746)
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AA seq
723 aa
AA seq
DB search
MIDPSLLLDGLNDKQREAVAAPLENLLILAGAGSGKTRVLVHRIAWLMSVEEASPFSVMA
VTFTNKAAAEMRGRIEELMHGTASGMWCGTFHGICHRILRAHYLDAKLLEDFQIIDSDDQ
QRLLKRLIKAHNLDDKQWPARQVAWWINNQKDEGLRPAHINAFDPVTQTYLKLYTAYQEA
CDRAGLVDFAEILLRALELLRGNQHIREHYQARFKHILVDEFQDTNAIQYAWLRMMAGAQ
SNVMIVGDDDQSIYGWRGARVENIEKFTREFPSVNTIRLEQNYRSTKTILEASNTLIANN
SERMGKQLWTEGLVGEPISVYSAYNELDEARFVVSKIKGWQEQGGTLTDCAILYRNNAQS
RVLEEALLQASLAYRIYGGMRFFERQEIKDALSYLRLINNRNNDTAFERVINTPPRGLGD
KTLETIRFAARDRGCTLWDASVGLLNDQVLTGRAASALSRFVELINALEEEGIDMPLHVL
TDHAVKTSGLFEMYQQEKGEKSKARIENLEELVTATRQFEKPEEAQDMTMLTAFLTHAAL
EAGEGQADEHDDAVQLMTLHSAKGLEFPQVFMVGVEEGMFPSQMSAEEAGRLEEERRLCY
VGMTRAMQKLYITYAEMRRLYGQDKYHKPSRFIRELPEGCLDEVRMKAQVSRPTSTGRFS
QTVVKESFNETGFSLGSRVRHPKFGEGTIINFEGSGPQSRVQVAFNGEGIKWLVTAYARL
EKV
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
atgatcgatccctctctattgctcgacggtctcaacgataaacaacgcgaagcggtggca
gcgccactggaaaacttactgattttggccggtgccggcagtggcaaaacccgcgtgcta
gtgcaccggattgcgtggctgatgtcggtggaagaagcctcaccgttttcggtgatggcg
gtgacctttaccaacaaagccgcagcagaaatgcgtggccgaattgaagagctgatgcat
ggcaccgcctctggcatgtggtgcggcactttccacggtatttgccaccgcattctgcgc
gcccattatctggatgctaagctgctggaagattttcagatcatcgacagtgacgatcag
cagcgtctgctcaaacgcctcatcaaagcgcacaatctggatgataaacagtggccagca
cgccaagtcgcgtggtggatcaacaatcaaaaagatgaaggattgcgcccagcgcacatc
aacgcctttgatccggttactcaaacttatctcaagttgtataccgcttaccaagaagcg
tgcgatcgcgcgggcttggttgatttcgccgaaattctgctgcgcgccctagagcttctg
cgtggtaatcagcacattcgcgagcattatcaggcgcgctttaagcatattttggtcgat
gaattccaagacaccaacgcgattcagtacgcgtggctgcgtatgatggcgggtgctcag
tcgaatgtgatgatcgtgggtgatgatgaccaatcgatatacggctggcgtggcgcgcga
gtggaaaacatcgaaaaatttacccgcgaatttccgagcgtgaataccattcgactggag
caaaactaccgctccaccaaaaccattttggaagcctcaaacacactgatcgccaataac
agcgagcggatgggcaagcagctgtggactgagggcttagttggcgaacctatttcggtg
tattcagcgtataacgagctcgatgaagcgcgctttgtggtcagcaaaatcaaaggttgg
caggagcaaggcggcacactgaccgattgcgcgatcttgtatcgtaacaacgcccagtca
cgggtactggaagaggcgttattgcaggcgagcttggcctatcgaatttatggcgggatg
cgctttttcgaacgccaagagatcaaagatgcgctgagttatctgcgtttgattaataac
cgtaataacgacaccgcctttgagcgagtgattaatacaccgccgcgcggtttgggtgat
aaaaccctagagaccattcgctttgccgcgcgcgatcgcggctgcaccttgtgggatgcc
agtgtcggtctgctcaatgaccaagtgctcactgggcgtgctgcgagcgcgctgagccgc
tttgttgaactgatcaacgccttggaagaggaaggcatcgacatgccactgcatgtgctg
actgaccatgcggtgaaaacctccggcttatttgagatgtatcagcaggaaaaaggcgaa
aaatccaaagcgaggattgaaaacttggaagagctggtgacggcgacgcgccagtttgaa
aagccagaagaagcgcaggatatgaccatgctgaccgcatttttgacccatgcggcactg
gaagctggcgaaggccaagccgatgagcatgatgatgcggtacagctgatgaccttgcac
agtgctaaagggttggaattccctcaagtgtttatggtgggtgtggaagagggcatgttc
ccgagccaaatgtctgctgaagaagccgggcgcctcgaagaagagcgccgcctgtgttat
gtcggcatgacgcgtgcgatgcaaaagctctacatcacctacgcggagatgcgtcgtttg
tacgggcaagataagtatcacaaaccctcacgctttattcgtgaactgccggaaggctgc
ttagacgaagtgcgcatgaaagcacaagtcagccgcccaaccagtacgggacgctttagc
caaacggtagttaaagagagttttaacgaaacggggtttagtttgggttcacgagtgcgt
cacccgaaatttggtgaaggcaccatcattaactttgaaggcagtggtccgcaaagccga
gtgcaagtggcgtttaatggcgaaggcattaagtggttagtcacggcttatgcaagattg
gagaaggtgtaa
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