Vibrio metoecus: QYQ96_13060
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Entry
QYQ96_13060 CDS
T09673
Symbol
fadB
Name
(GenBank) fatty acid oxidation complex subunit alpha FadB
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
vmt
Vibrio metoecus
Pathway
vmt00071
Fatty acid degradation
vmt00280
Valine, leucine and isoleucine degradation
vmt00310
Lysine degradation
vmt00362
Benzoate degradation
vmt00380
Tryptophan metabolism
vmt00410
beta-Alanine metabolism
vmt00640
Propanoate metabolism
vmt00650
Butanoate metabolism
vmt00907
Pinene, camphor and geraniol degradation
vmt00930
Caprolactam degradation
vmt01100
Metabolic pathways
vmt01110
Biosynthesis of secondary metabolites
vmt01120
Microbial metabolism in diverse environments
vmt01200
Carbon metabolism
vmt01212
Fatty acid metabolism
Module
vmt_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
vmt00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
QYQ96_13060 (fadB)
00650 Butanoate metabolism
QYQ96_13060 (fadB)
09103 Lipid metabolism
00071 Fatty acid degradation
QYQ96_13060 (fadB)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
QYQ96_13060 (fadB)
00310 Lysine degradation
QYQ96_13060 (fadB)
00380 Tryptophan metabolism
QYQ96_13060 (fadB)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
QYQ96_13060 (fadB)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
QYQ96_13060 (fadB)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
QYQ96_13060 (fadB)
00930 Caprolactam degradation
QYQ96_13060 (fadB)
Enzymes [BR:
vmt01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
QYQ96_13060 (fadB)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
QYQ96_13060 (fadB)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
QYQ96_13060 (fadB)
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
QYQ96_13060 (fadB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
DUF5546
NAD_binding_2
Motif
Other DBs
NCBI-ProteinID:
WKY93112
LinkDB
All DBs
Position
1:2851715..2853886
Genome browser
AA seq
723 aa
AA seq
DB search
MIYQAKTLQVNQLANGIAELSFCAPASVNKLDLHTLESLDKALDALAADPSVKGLLLSSD
KEAFIVGADITEFLGLFAKPEAELDEWLQFANRIFNKLEDLPFPTLSALKGHTLGGGCEC
VLATDFRIGDATTSIGLPETKLGIMPGFGGTVRLPRLIGADSAMEIITQGKACRAEEALK
VGLLDAIVDSDRLIDSAITTLTQAIEEKLDWQKRRQQKTSALTLSKLEAMMSFTMAKGLV
AQVAGKHYPAPMTAVVAIEEAARLSRDTALDIERKHFIKLAKSTEAQALVGIFLNDQYIK
GLAKQSAKAASQDTTHAAVLGAGIMGGGIAYQSALKGVPVLMKDIAPHSLELGMTEAAKL
LNKQLERGKIDGFKMAGILASITPSLHYAGIDQADVIVEAVVENPKVKAAVLSEVEGLVD
AETILTSNTSTIPINLLAKSLKRPQNFCGMHFFNPVHRMPLVEIIRGEHTSEDTINRVVA
YAAKMGKSPIVVNDCPGFFVNRVLFPYFAGFSLLMRDGANFTEIDKVMERQFGWPMGPAY
LLDVVGIDTAHHAQAVMAEGFPTRMAKSGREAIDALYEAKKFGQKNGSGFYQYTVDKKGK
PKKAFSDEVLAILAPVCGAPQSFDPQTIIERTMIPMINEVVLCLEEGIIASAQEADMALV
YGLGFPPFRGGVFRYLDTIGVANYVAMAEKYASLGALYQVPQLLKSMAQQGKSFYSAQQA
SAL
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
atgatttaccaagccaaaaccctacaggtaaaccaactcgctaatggaattgccgagctg
tccttttgcgctcccgcttccgttaacaaactcgatctacacactctggagtcactcgat
aaagcgttagatgcgctcgccgcggatcccagtgtcaaaggcctcctgcttagctcagat
aaagaggcttttatcgtcggcgctgatatcaccgaatttctggggctatttgccaaacca
gaagcggagttggatgagtggttgcagtttgccaatcgcatttttaacaagctggaagac
ttacctttcccgaccttgtcagcgttgaaaggtcacacacttggtggcggctgcgaatgt
gtgcttgctaccgattttcgtattggtgatgccaccaccagcattggtttacctgaaacc
aaactgggcatcatgccgggatttggcggcacagtgcgtctacctcgtttgattggcgca
gacagcgcaatggaaatcataacccaaggtaaagcgtgccgcgcggaagaggctttaaaa
gtgggattactggatgcgattgtcgatagcgacagactgatcgattccgcaatcaccact
ttgactcaagcgattgaagagaaactggattggcaaaaacgccgtcagcagaaaacctca
gcactgaccttaagcaaactggaagccatgatgagttttaccatggcgaaaggtttggtg
gctcaggtggcaggcaaacactacccagcaccaatgaccgcggtcgtcgccattgaagaa
gcggcgcgtttatcacgcgatactgcgctagatatcgagcgcaaacacttcatcaagctc
gcaaaatctaccgaagcgcaagcgctagttggtattttcctcaatgatcaatacatcaaa
ggcctagccaaacaatcggcaaaagccgcgagccaagataccacacacgccgccgtgctc
ggcgcgggcattatgggtgggggcatcgcgtatcaatcggctctcaaaggcgtacctgtg
ctgatgaaagacatcgcaccacactctttagaactgggcatgaccgaagcggccaaactc
ctcaacaaacagttagagcgcggcaagatcgatggtttcaaaatggctggcattctggct
tccatcaccccttctctgcattacgcagggattgatcaagccgatgtaattgtcgaagcc
gtggttgaaaacccgaaagtgaaagccgcggtactcagcgaagtggaaggattggtcgac
gcagagacgattctgacctccaacacctcgaccattccaattaatctcctcgctaaatca
ctcaagcgcccacagaatttctgtggcatgcacttttttaaccctgtgcatcgcatgcct
ttggtggaaatcatccgtggtgaacacacctcagaagacaccatcaaccgagtggttgct
tatgcggcgaaaatgggcaaatcaccgattgtggtcaatgactgcccaggattcttcgtt
aaccgcgtgctgttcccttactttgcgggctttagtctgctgatgcgtgatggcgcgaac
ttcaccgaaatcgacaaagtgatggagcgtcaattcggctggccaatgggcccggcgtat
ttgcttgatgtagtcggcattgatactgcacaccatgctcaggcagtgatggcggaaggc
ttcccaactcgcatggcgaaaagcggccgagaagcgattgatgccctgtacgaagcgaaa
aaatttggccagaaaaatggcagcggcttctatcagtacacagtagataaaaaaggcaaa
ccgaaaaaagccttcagcgatgaagtgctcgccattctcgcgcctgtatgcggcgcacca
caaagctttgacccacaaaccattatcgaacgcaccatgattccgatgattaatgaagtg
gtgctctgtcttgaagaagggatcatcgcttctgcgcaagaagcagatatggcgctggtg
tacggtcttggtttccctccgttccgtggaggtgtattccgttacctagataccatcggt
gtcgctaactatgtggctatggcagaaaaatacgccagcctcggcgcactctatcaagta
ccgcaactgctgaagagcatggcgcaacaaggaaaatctttctacagcgctcagcaagcc
agtgctctgtaa
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