Vibrio metoecus: QYQ96_18370
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Entry
QYQ96_18370 CDS
T09673
Name
(GenBank) DNA-3-methyladenine glycosylase 2 family protein
KO
K13529
AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
vmt
Vibrio metoecus
Pathway
vmt03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
vmt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
QYQ96_18370
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vmt03000
]
QYQ96_18370
03400 DNA repair and recombination proteins [BR:
vmt03400
]
QYQ96_18370
Enzymes [BR:
vmt01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
QYQ96_18370
Transcription factors [BR:
vmt03000
]
Prokaryotic type
Helix-turn-helix
AraC family
QYQ96_18370
DNA repair and recombination proteins [BR:
vmt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
QYQ96_18370
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AlkA_N
Ada_Zn_binding
HTH_18
HTH_AraC
HhH-GPD
YdaS_toxin
Motif
Other DBs
NCBI-ProteinID:
WKY94789
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Position
2:1001487..1002845
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AA seq
452 aa
AA seq
DB search
MALSNSCNTEEYQRARMSRDPRFDGRFFVAVKTTGIFCRPICPANLPKEENVEYFTTQAQ
AVSAGYRPCLRCRPESAPHSWAWKGAETTFLRALKLIEQGELQGNLDALASRLGISDRYL
RQLFQRHLGMPPKQYAQIQQLMFAKQLLHSSRMSVTEVAYASGFQSTRRFNDAFQKLFRL
TPTQVRRERANLPSRNQLTLGFRGPFDWMHMLDFYRLRAIDGIECVDEQSYQRHFVLGEG
KGWFKASREESHLQIEFEMEHLSDLRHLVARLRRMFDLDADLITIESQLEQVAPGLVLRS
GIRIPGVWNAWEAGVRAVLGQQVSVKAAIGQLNVLVSQLTGGEGAARYFPTPHQVQAHDL
SFLRMPERRKQTLKRLAEYVVQHPLDSPSHWLSLSGIGPWTVDYALLRGESQSDRFLMGD
LVVKKARVPFPQLTPESVAPWGSYATFHCWSH
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atggcattgtcgaattcgtgtaataccgaagaatatcaaagagctaggatgagtcgcgat
ccgcgttttgatgggcgcttctttgtggcagtgaaaaccacgggcattttttgtcgcccg
atatgtcccgccaatctcccgaaagaagagaatgtagagtatttcaccacccaagctcag
gcggtttcggcggggtaccgaccttgcttgcgttgtcgtccagaaagtgcgccgcattcg
tgggcttggaaaggggcagaaaccacgtttttacgggctttgaagctaatcgaacaagga
gaattacagggaaatttggatgcgttagcttctcgattagggatcagtgatcggtattta
cggcagttatttcagcgccatttagggatgccacctaaacaatacgcccagatccaacaa
ttgatgtttgccaagcagctgctgcattcgagccgaatgtccgtgaccgaagtggcttat
gccagtgggtttcaaagtactcgacgttttaatgatgcatttcaaaagctattccgttta
acgccaacgcaagttcggcgtgaacgggctaatttaccgtcacgtaaccaactcacctta
gggtttcgtggtccctttgactggatgcatatgttggatttttatcgtctgcgggcgatt
gacggtatagagtgtgttgatgaacaaagttaccaacgtcattttgtattgggtgaaggt
aaaggctggtttaaagcaagccgagaagaatcccacttacagattgagttcgaaatggaa
catttgagtgatttgcgccatttggttgcgcggttgcggcgaatgtttgatctggatgcc
gatctgattacgatagaatcgcaacttgagcaggttgcacctgggttagtgctgcgttca
gggatccgcattcccggtgtttggaatgcgtgggaggcgggcgttcgtgcggtactgggg
cagcaagtttcggtgaaagcggcgattgggcaactcaacgtattggtgtctcaattgact
ggcggggaaggggctgctcgctattttccgactcctcaccaagttcaagctcatgattta
agctttttacggatgccggaacgccgcaaacagacgctaaaacgtttggcggagtatgtt
gttcagcaccctctcgactctccatcgcactggttatcacttagtggaattggaccatgg
accgtcgattacgctttgttgcgtggtgaatcgcagagtgaccgttttttaatgggggac
ttggtggtcaaaaaagcacgggtaccatttccgcagttaacgcctgaatctgttgcccct
tgggggagctatgccactttccattgttggagccattaa
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