KEGG   Vibrio natriegens: PN96_00435
Entry
PN96_00435        CDS       T04636                                 
Name
(GenBank) ATP-dependent helicase
  KO
K03580  ATP-dependent helicase HepA [EC:5.6.2.-]
Organism
vna  Vibrio natriegens
Brite
KEGG Orthology (KO) [BR:vna00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:vna03021]
    PN96_00435
Transcription machinery [BR:vna03021]
 Prokaryotic type
  Bacterial type
   Other transcription-related factors
    RNA polymerase-associated proteins
     PN96_00435
SSDB
Motif
Pfam: RapA_C Tudor_1_RapA Tudor_RapA Helicase_C SNF2-rel_dom ResIII DEAD Cas3-like_C_2 AAA_34 Helicase_C_2 WWE RelB-like COG2_N
Other DBs
NCBI-ProteinID: ALR14538
UniProt: A0AAN1CWD2
LinkDB
Position
1:98778..101687
AA seq 969 aa
MTFALGQRWISDTESDLGLGTVVAMDARTVTLMFSASEENRVYARNDAPVTRVTFNVGDV
IDCQEGWSLKVEEVLEDEGLYTYFGTREDTQETAVVLREIFLSNQIRFNKPQDKLYAGQI
DRMDNFVLRYRALTNQFEQHKSPMRGLCGMRAGLIPHQLYIAHEVGRRHAPRVLLADEVG
LGKTIEAGMIIHQQVLSGRAERILIVVPETLQHQWLVEMMRRFNLHFSIFDEERCIEAFA
DAENPFDTQQYVLCSLDFLRKSRKRFEQALEGEWDLLVVDEAHHLEWSQDKPSREYQVVE
GLAERTPGVLLLTATPEQLGRESHFARLRLLDPDRFYDYEAFVEEEEQYAPVADAITSLF
TGEKLPNDAKNQITELLSEQDVEPLFRIIESNSDEEDKASARQELIDNLMDRHGTGRVLF
RNTRAAIKGFPARNVHLMPMDIPQQYTTSMRVAGMIGGKMSSEARAMKNLYPEEIFQEFE
GDESSWWQFDSRVNWLLEKVTEKRSEKILVIASRASTALQLEQALREREGIRATVFHEGM
SILERDKAAAYFAQEEGGAQVLICSEIGSEGRNFQFANQLVMFDLPFNPDLLEQRIGRLD
RIGQNRDIDIHVPYLKGTSQAILARWFDEGLNAFAETCPTGRAVYDKYSDALIEILASGD
TSELDDIIEESAKMNKQLKSQLEQGRDRLLEMHSNGGEKAQQIVEKISSTDGDTNLVTFA
LSLFDTIGLNQDDKGENALVVTPSEHMMVPSYPGLPYEGATITFDRETALSREDMHFISW
EHPMIQGGIDLLMSEGVGTSAVSLLKNKALPVGTILLELIYAVDAQAPKRSGIARFLPKT
PIRLMMDARGNDLSAQVEFESFNRQLSPVNRHLGSKLVTSVQKDVHRLIEAGDGLVEQKV
EEVRKQAQQDMQHSLNAELERLQALKAVNPNIRDEEIETIDAQIKELTGYINQAQVQLDS
LRLIVVSHN
NT seq 2910 nt   +upstreamnt  +downstreamnt
atgacatttgctttggggcagcgctggattagtgatacggaaagcgatttaggtttgggt
acggtagttgcgatggatgctcgtactgtgacgttgatgttttcagcatcagaggaaaac
cgagtttacgcacgcaatgatgcacctgttacccgagtgacgtttaacgttggtgatgtt
atcgattgccaggaaggttggtctctgaaggtcgaagaagtgctggaagatgaaggtctg
tacacttactttggtacccgtgaagatactcaggaaaccgcagtcgtactgcgcgaaatt
ttcctcagcaaccaaattcgcttcaacaaacctcaagataagttgtacgcaggtcaaatt
gatcgtatggacaacttcgttctgcgttaccgtgcactcaccaatcagtttgaacaacat
aagagcccaatgcgtggtctttgcggtatgcgtgctggtctgattccccatcagctttac
attgcgcatgaagtcggtcgccgtcacgcgcctcgtgtactcctggccgatgaagttggt
ctgggtaaaaccatcgaagcgggtatgatcattcaccagcaagtcttgtcgggtcgcgct
gagcgtattttgattgtggtgcctgaaacactgcaacaccaatggctggtagagatgatg
cgtcgtttcaatctgcatttctcaatctttgatgaagagcgttgtattgaagccttcgcg
gatgcagaaaacccatttgatacccagcaatacgtattgtgttcactggatttcctgcgc
aagagccgtaagcgctttgagcaagctctggaaggcgagtgggatctactggttgtcgat
gaagcgcatcacctagagtggagccaggacaaaccaagtcgtgaataccaagtcgttgaa
ggtttggctgaacgcacaccaggcgtattactactgaccgcaacacctgaacaattaggt
cgtgagagtcactttgctcgtctgcgcctgcttgaccctgatcgtttctacgattacgaa
gcgtttgttgaggaagaagagcaatacgcaccagttgctgatgcgattacttcactgttt
actggtgaaaaactgcctaacgacgctaaaaaccaaatcactgaactgttgtctgagcag
gatgttgagccgcttttccgaattattgaaagcaacagcgatgaagaggacaaagcgtca
gctcgtcaggaattgatcgacaacctgatggatcgccacggtacaggtcgtgttttgttc
cgaaacacacgtgcggccatcaaaggtttcccagcgcgtaatgtgcacttgatgccaatg
gatatcccacagcaatacacaacctcaatgcgtgtcgctggcatgatcggcggcaagatg
agttctgaagctcgtgctatgaaaaacctctatccggaagagatcttccaggagtttgaa
ggtgacgaatcaagctggtggcaatttgactcacgtgtgaactggttactggaaaaagta
acagaaaaacgcagtgagaagatcctggttatcgcatctcgtgcaagtaccgctttgcag
ttagagcaggcgttgcgtgaacgtgaaggcatccgcgcgaccgtgttccacgaaggcatg
tcaatcctagagcgtgacaaagcagccgcttactttgctcaggaagagggtggcgctcag
gttcttatctgtagtgaaattggctcagaaggtcgtaacttccagttcgccaaccagttg
gtgatgtttgatctgccgttcaacccagatttgcttgaacagcgtatcggtcgtttagac
cgtatcggtcaaaaccgcgacattgatattcacgttccttacctgaaaggtacgtcacaa
gcgattctggctcgttggttcgacgaaggcttgaatgcgtttgctgagacttgtccaacc
ggtcgtgcggtttacgataaatactcggatgctctgattgagattctggcatctggtgac
accagtgaactggacgacattattgaagaatcagcgaaaatgaacaaacagctgaaatct
caattggagcaaggtcgtgatcgtctgctagaaatgcactctaacggcggtgagaaagcg
cagcaaatcgttgagaaaatctcttcaacggatggtgataccaatctggtgacttttgct
ttgtcactgttcgatacgattggcctgaaccaggatgacaaaggtgaaaacgcattggtt
gtgacgccatctgaacacatgatggtacctagctacccgggtctgccttatgaaggtgcg
accattacgtttgatcgtgaaactgcgctgtcgcgtgaagatatgcactttatcagctgg
gaacacccgatgatccagggtggtatcgatcttctgatgagtgaaggcgtgggtacgtct
gcggtgtctttactgaagaataaagcactgccagttggtacgattctgcttgaactgatt
tacgctgtggatgctcaggctccgaaacgcagcggaattgctcgcttcctgccaaaaaca
ccaattcgcctaatgatggatgcgcgcggtaacgacttatctgcgcaagttgagtttgaa
agcttcaaccgtcagctgagcccggtaaaccgccatcttggcagtaagctagtgacgtcg
gtacaaaaagatgtgcaccgtttgattgaagcaggtgatggactggttgagcagaaagtc
gaagaagtgcgcaagcaggctcagcaagatatgcagcatagcttgaacgcagagcttgag
cgtttgcaggcactgaaagcagtcaacccgaacattcgtgacgaagaaattgaaacgatt
gatgcacagattaaagagctgacaggctacattaatcaagctcaggtacagctggactca
ttacgtttgattgttgtcagccacaactaa

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