Vibrio natriegens: PN96_00435
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Entry
PN96_00435 CDS
T04636
Name
(GenBank) ATP-dependent helicase
KO
K03580
ATP-dependent helicase HepA [EC:5.6.2.-]
Organism
vna
Vibrio natriegens
Brite
KEGG Orthology (KO) [BR:
vna00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vna03021
]
PN96_00435
Transcription machinery [BR:
vna03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
PN96_00435
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RapA_C
Tudor_1_RapA
Tudor_RapA
Helicase_C
SNF2-rel_dom
ResIII
DEAD
Cas3-like_C_2
AAA_34
Helicase_C_2
WWE
RelB-like
COG2_N
Motif
Other DBs
NCBI-ProteinID:
ALR14538
UniProt:
A0AAN1CWD2
LinkDB
All DBs
Position
1:98778..101687
Genome browser
AA seq
969 aa
AA seq
DB search
MTFALGQRWISDTESDLGLGTVVAMDARTVTLMFSASEENRVYARNDAPVTRVTFNVGDV
IDCQEGWSLKVEEVLEDEGLYTYFGTREDTQETAVVLREIFLSNQIRFNKPQDKLYAGQI
DRMDNFVLRYRALTNQFEQHKSPMRGLCGMRAGLIPHQLYIAHEVGRRHAPRVLLADEVG
LGKTIEAGMIIHQQVLSGRAERILIVVPETLQHQWLVEMMRRFNLHFSIFDEERCIEAFA
DAENPFDTQQYVLCSLDFLRKSRKRFEQALEGEWDLLVVDEAHHLEWSQDKPSREYQVVE
GLAERTPGVLLLTATPEQLGRESHFARLRLLDPDRFYDYEAFVEEEEQYAPVADAITSLF
TGEKLPNDAKNQITELLSEQDVEPLFRIIESNSDEEDKASARQELIDNLMDRHGTGRVLF
RNTRAAIKGFPARNVHLMPMDIPQQYTTSMRVAGMIGGKMSSEARAMKNLYPEEIFQEFE
GDESSWWQFDSRVNWLLEKVTEKRSEKILVIASRASTALQLEQALREREGIRATVFHEGM
SILERDKAAAYFAQEEGGAQVLICSEIGSEGRNFQFANQLVMFDLPFNPDLLEQRIGRLD
RIGQNRDIDIHVPYLKGTSQAILARWFDEGLNAFAETCPTGRAVYDKYSDALIEILASGD
TSELDDIIEESAKMNKQLKSQLEQGRDRLLEMHSNGGEKAQQIVEKISSTDGDTNLVTFA
LSLFDTIGLNQDDKGENALVVTPSEHMMVPSYPGLPYEGATITFDRETALSREDMHFISW
EHPMIQGGIDLLMSEGVGTSAVSLLKNKALPVGTILLELIYAVDAQAPKRSGIARFLPKT
PIRLMMDARGNDLSAQVEFESFNRQLSPVNRHLGSKLVTSVQKDVHRLIEAGDGLVEQKV
EEVRKQAQQDMQHSLNAELERLQALKAVNPNIRDEEIETIDAQIKELTGYINQAQVQLDS
LRLIVVSHN
NT seq
2910 nt
NT seq
+upstream
nt +downstream
nt
atgacatttgctttggggcagcgctggattagtgatacggaaagcgatttaggtttgggt
acggtagttgcgatggatgctcgtactgtgacgttgatgttttcagcatcagaggaaaac
cgagtttacgcacgcaatgatgcacctgttacccgagtgacgtttaacgttggtgatgtt
atcgattgccaggaaggttggtctctgaaggtcgaagaagtgctggaagatgaaggtctg
tacacttactttggtacccgtgaagatactcaggaaaccgcagtcgtactgcgcgaaatt
ttcctcagcaaccaaattcgcttcaacaaacctcaagataagttgtacgcaggtcaaatt
gatcgtatggacaacttcgttctgcgttaccgtgcactcaccaatcagtttgaacaacat
aagagcccaatgcgtggtctttgcggtatgcgtgctggtctgattccccatcagctttac
attgcgcatgaagtcggtcgccgtcacgcgcctcgtgtactcctggccgatgaagttggt
ctgggtaaaaccatcgaagcgggtatgatcattcaccagcaagtcttgtcgggtcgcgct
gagcgtattttgattgtggtgcctgaaacactgcaacaccaatggctggtagagatgatg
cgtcgtttcaatctgcatttctcaatctttgatgaagagcgttgtattgaagccttcgcg
gatgcagaaaacccatttgatacccagcaatacgtattgtgttcactggatttcctgcgc
aagagccgtaagcgctttgagcaagctctggaaggcgagtgggatctactggttgtcgat
gaagcgcatcacctagagtggagccaggacaaaccaagtcgtgaataccaagtcgttgaa
ggtttggctgaacgcacaccaggcgtattactactgaccgcaacacctgaacaattaggt
cgtgagagtcactttgctcgtctgcgcctgcttgaccctgatcgtttctacgattacgaa
gcgtttgttgaggaagaagagcaatacgcaccagttgctgatgcgattacttcactgttt
actggtgaaaaactgcctaacgacgctaaaaaccaaatcactgaactgttgtctgagcag
gatgttgagccgcttttccgaattattgaaagcaacagcgatgaagaggacaaagcgtca
gctcgtcaggaattgatcgacaacctgatggatcgccacggtacaggtcgtgttttgttc
cgaaacacacgtgcggccatcaaaggtttcccagcgcgtaatgtgcacttgatgccaatg
gatatcccacagcaatacacaacctcaatgcgtgtcgctggcatgatcggcggcaagatg
agttctgaagctcgtgctatgaaaaacctctatccggaagagatcttccaggagtttgaa
ggtgacgaatcaagctggtggcaatttgactcacgtgtgaactggttactggaaaaagta
acagaaaaacgcagtgagaagatcctggttatcgcatctcgtgcaagtaccgctttgcag
ttagagcaggcgttgcgtgaacgtgaaggcatccgcgcgaccgtgttccacgaaggcatg
tcaatcctagagcgtgacaaagcagccgcttactttgctcaggaagagggtggcgctcag
gttcttatctgtagtgaaattggctcagaaggtcgtaacttccagttcgccaaccagttg
gtgatgtttgatctgccgttcaacccagatttgcttgaacagcgtatcggtcgtttagac
cgtatcggtcaaaaccgcgacattgatattcacgttccttacctgaaaggtacgtcacaa
gcgattctggctcgttggttcgacgaaggcttgaatgcgtttgctgagacttgtccaacc
ggtcgtgcggtttacgataaatactcggatgctctgattgagattctggcatctggtgac
accagtgaactggacgacattattgaagaatcagcgaaaatgaacaaacagctgaaatct
caattggagcaaggtcgtgatcgtctgctagaaatgcactctaacggcggtgagaaagcg
cagcaaatcgttgagaaaatctcttcaacggatggtgataccaatctggtgacttttgct
ttgtcactgttcgatacgattggcctgaaccaggatgacaaaggtgaaaacgcattggtt
gtgacgccatctgaacacatgatggtacctagctacccgggtctgccttatgaaggtgcg
accattacgtttgatcgtgaaactgcgctgtcgcgtgaagatatgcactttatcagctgg
gaacacccgatgatccagggtggtatcgatcttctgatgagtgaaggcgtgggtacgtct
gcggtgtctttactgaagaataaagcactgccagttggtacgattctgcttgaactgatt
tacgctgtggatgctcaggctccgaaacgcagcggaattgctcgcttcctgccaaaaaca
ccaattcgcctaatgatggatgcgcgcggtaacgacttatctgcgcaagttgagtttgaa
agcttcaaccgtcagctgagcccggtaaaccgccatcttggcagtaagctagtgacgtcg
gtacaaaaagatgtgcaccgtttgattgaagcaggtgatggactggttgagcagaaagtc
gaagaagtgcgcaagcaggctcagcaagatatgcagcatagcttgaacgcagagcttgag
cgtttgcaggcactgaaagcagtcaacccgaacattcgtgacgaagaaattgaaacgatt
gatgcacagattaaagagctgacaggctacattaatcaagctcaggtacagctggactca
ttacgtttgattgttgtcagccacaactaa
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