KEGG   Vibrio natriegens: PN96_01345
Entry
PN96_01345        CDS       T04636                                 
Name
(GenBank) dihydrolipoamide dehydrogenase
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
vna  Vibrio natriegens
Pathway
vna00010  Glycolysis / Gluconeogenesis
vna00020  Citrate cycle (TCA cycle)
vna00260  Glycine, serine and threonine metabolism
vna00280  Valine, leucine and isoleucine degradation
vna00310  Lysine degradation
vna00380  Tryptophan metabolism
vna00620  Pyruvate metabolism
vna00630  Glyoxylate and dicarboxylate metabolism
vna00640  Propanoate metabolism
vna00670  One carbon pool by folate
vna00785  Lipoic acid metabolism
vna01100  Metabolic pathways
vna01110  Biosynthesis of secondary metabolites
vna01120  Microbial metabolism in diverse environments
vna01200  Carbon metabolism
vna01210  2-Oxocarboxylic acid metabolism
vna01240  Biosynthesis of cofactors
Module
vna_M00009  Citrate cycle (TCA cycle, Krebs cycle)
vna_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
vna_M00036  Leucine degradation, leucine => acetoacetate + acetyl-CoA
vna_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
vna_M00621  Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:vna00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    PN96_01345
   00020 Citrate cycle (TCA cycle)
    PN96_01345
   00620 Pyruvate metabolism
    PN96_01345
   00630 Glyoxylate and dicarboxylate metabolism
    PN96_01345
   00640 Propanoate metabolism
    PN96_01345
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    PN96_01345
   00280 Valine, leucine and isoleucine degradation
    PN96_01345
   00310 Lysine degradation
    PN96_01345
   00380 Tryptophan metabolism
    PN96_01345
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    PN96_01345
   00670 One carbon pool by folate
    PN96_01345
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:vna04147]
    PN96_01345
Enzymes [BR:vna01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     PN96_01345
Exosome [BR:vna04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   PN96_01345
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Pyr_redox FAD_oxidored Pyr_redox_3 GIDA FAD_binding_2 AlaDh_PNT_C NAD_binding_8 HI0933_like FAD_binding_3 Thi4 DAO
Other DBs
NCBI-ProteinID: ALR14684
UniProt: A0AAN0Y5C5
LinkDB
Position
1:266546..267973
AA seq 475 aa
MSKEIKAQVVVLGSGPAGYSAAFRCADLGLETVLVERYSTLGGVCLNVGCIPSKALLHVS
KVIEEAKAMADHGVVFGEPQTDINKIRIWKEKVVNQLTGGLGGMAKMRNVTVVNGYGKFT
GPNSILVEGEGESTVVNFDNAIVAAGSRPIKLPFIPHEDPRIWDSTDALELKEVPEKLLI
MGGGIIGLEMGTVYHSLGSKVEVVEMFDQVIPAADKDIVKVYTKRIKDKFKLMLETKVTA
VEAKEDGIYVSMEGKKAPAEAERYDAVLVAIGRVPNGKLIDGEKAGLEIDERGFINVDKQ
MRTNVPHIFAIGDIVGQPMLAHKGVHEGHVAAEVISGKKHYFDPKVIPSIAYTEPEVAWV
GKTEKEAKDEGIKYEVATFPWAASGRAIASDCSDGMTKLIFDKETHRVIGGAIVGTNGGE
LLGEIGLAIEMGCDAEDIALTIHAHPTLHESVGLAAEVFEGSITDLPNKKAVKKK
NT seq 1428 nt   +upstreamnt  +downstreamnt
atgagcaaagaaattaaagcccaagttgttgtacttggttctggtcctgctggttactct
gcagcattccgttgtgcggatttaggtcttgaaactgtactagttgaacgttacagcact
cttggcggtgtgtgtctgaacgtgggttgtatcccatctaaagcacttcttcacgtttct
aaagtaattgaagaagcaaaagcaatggctgatcacggcgttgtatttggcgaaccgcaa
actgacatcaacaaaatccgcatctggaaagaaaaagttgttaaccaacttactggcggc
ctaggtggcatggctaagatgcgtaacgtaactgtagttaacggttacggtaagtttact
ggtcctaactctatccttgtagaaggtgaaggcgagtcaactgttgttaacttcgacaac
gcaatcgttgctgctggttctcgtccaatcaaactgccatttatcccgcatgaagaccca
cgtatttgggattctactgacgctcttgaactaaaagaagtgccagaaaaactacttatc
atgggtggtggtatcatcggtctggaaatgggtacggtttaccactctctaggttctaaa
gttgaagttgttgagatgtttgatcaggtaatccctgcagcagacaaagatatcgttaag
gtttacaccaagcgtatcaaagacaagttcaagctaatgctagaaacgaaagtaacagca
gttgaagcgaaagaagacggtatctacgtttcaatggaaggtaagaaagcacctgctgaa
gcagagcgctacgatgctgttcttgttgctatcggtcgtgtaccaaacggcaaactgatt
gacggtgaaaaagcgggtctagaaatcgacgagcgcggcttcatcaacgttgacaagcaa
atgcgtactaacgttcctcacatcttcgcgatcggtgatatcgttggtcaaccaatgctt
gctcacaaaggtgtgcatgaaggtcacgtagcagctgaagttatctctggtaagaagcac
tactttgaccctaaagttatcccttcaatcgcatacactgagccagaagtggcttgggtt
ggtaagactgagaaagaagcgaaagacgaaggcatcaagtacgaagtggcaacattccca
tgggctgcatcaggtcgtgcaatcgcatctgactgttcagacggtatgactaagctaatc
ttcgacaaagaaactcaccgcgtaatcggtggtgctatcgttggtactaacggtggtgaa
ctacttggcgaaatcggtcttgcgatcgagatgggttgtgatgcagaagatatcgctctg
actatccacgctcacccaactctacacgagtctgttggtctagctgctgaagtatttgaa
ggttctatcactgaccttccaaacaaaaaagcagttaagaagaagtaa

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