Vibrio natriegens: PN96_01695
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Entry
PN96_01695 CDS
T04636
Name
(GenBank) c-di-GMP phosphodiesterase
KO
K20965
c-di-GMP phosphodiesterase [EC:
3.1.4.52
]
Organism
vna
Vibrio natriegens
Pathway
vna05111
Biofilm formation - Vibrio cholerae
Brite
KEGG Orthology (KO) [BR:
vna00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
05111 Biofilm formation - Vibrio cholerae
PN96_01695
Enzymes [BR:
vna01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.52 cyclic-guanylate-specific phosphodiesterase
PN96_01695
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Gene cluster
GFIT
Motif
Pfam:
EAL
GGDEF
PAS_4
PAS_8
PAS
PAS_9
Motif
Other DBs
NCBI-ProteinID:
ALR14748
UniProt:
A0AAN1CW82
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All DBs
Position
1:complement(356330..358369)
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AA seq
679 aa
AA seq
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MPSQQLQHWFATLTSNSPFFFAILDKKHNYRMVSDRYCDIAGLSNAEIIGLNDVHVLGEQ
FYKKLAPYYQRAFDGTHIEAEITLDETDLETSLHFSLSPVYEGNEIRHVVFHAVDTSEKQ
ILVRSLEESESKFAKLTQLLPDGLLLIEEDVIISANPASARLLGINSPHDLLGEKLSRLF
IDENTKKVFGHPLSTLISDKPFICLTSARCGFERKVQLHADSTAILGSASQIILIQDADN
APKNLSASLGEDANIDSLTKLYNRFGFTKRLEQLIKKQTPLLLFYLDIDNFKNINDSLGH
HIGDKVIQEVSARLKRLLPSQAILGHLGSDEFGILLPEPENARMAEILSDRIISLINQPF
DLHHFSKRLACSIGSVRYPEDGQDARILLQNADTAMYEAKDRGRNRLIKFNDQMNKEARM
RLWLEIELQKALQQNGLEVWYQPKVNARDFSINGAEALVRWKHPVEGYISPGAFIPVAER
AGLIEHLGRVVMRDVFNTVKRWKQQSVLPGRVAINLSPEQFGNPQLIDFMEKLLRTTELD
PSCITFELTESAVMSDSEHTLQMLNAIKKLGFALSIDDFGTGYSSLSYLARFPIDELKID
RAFISDIDTLPKQVTVIENIINLGKSLDLSVVAEGVETHQQATLLSNLQCHSIQGFHFYR
PQPKHEIEELFVQNRRHKN
NT seq
2040 nt
NT seq
+upstream
nt +downstream
nt
atgccttcccagcaattacaacattggtttgccacgctaacctcaaatagccctttcttt
ttcgccatccttgataaaaaacacaattatcgaatggtgagtgatcgctattgtgatatc
gccggattgagtaatgcagagatcattggactcaacgatgtccacgttttgggagagcag
ttctataaaaagctggcgccttattatcaacgtgcttttgatggtacgcatatagaagcc
gagattactctggatgaaacggatctagaaaccagcctgcattttagtttgtcgcctgta
tatgagggtaatgaaatccggcatgtggtttttcatgctgtcgatacctcagagaaacaa
attcttgtccgctccctagaagagtccgagagcaagtttgccaaactcacccaacttttg
cccgatggtttattacttatcgaagaagatgtgattatttcggcgaatccagcatcggca
aggttgctcgggataaactcaccgcatgatctgcttggcgaaaagcttagccgtttgttc
attgatgaaaatactaaaaaagtcttcggccaccctttaagtacactgatttctgacaaa
ccttttatttgcctaaccagcgcgcgatgtgggtttgagcgtaaagtacagcttcatgct
gattcaacggccattctgggtagtgcctcacaaatcattttgattcaggatgccgacaat
gcacccaagaatttatcggcgtctttgggtgaagatgcgaatattgactccctgaccaag
ttgtacaaccgttttggttttactaaacgcctggaacaactgatcaaaaagcagacacca
ctactgctcttctatctggatatcgataactttaaaaatatcaacgattcactgggccat
catattggtgacaaagtgatccaagaggtctcagcacgcctgaagcgattattaccaagt
caggcaattcttgggcacctggggagtgatgaattcggtattctgttaccggagcctgaa
aatgcacgaatggctgaaattctgtcggatcgcattatttctctgatcaaccagcctttc
gatctacatcactttagtaaacgtcttgcttgttcaattggcagtgtccgctatccagaa
gatggccaagatgcccgaattttactgcaaaacgccgatactgcgatgtacgaggcgaaa
gatcgcgggcgaaaccgactgatcaaattcaacgatcaaatgaataaagaagcgcgcatg
cgtttgtggctggaaattgagctacaaaaagcacttcagcaaaatggtttggaagtctgg
tatcaaccaaaagtaaacgcgcgcgatttcagtatcaacggtgcagaagcactggtgcgc
tggaaacaccctgtcgaaggctatattagccctggtgcattcattcctgtcgccgaacga
gctgggttgatcgagcatcttggacgagtggtgatgcgtgatgttttcaatacagtaaaa
cgctggaagcagcaaagtgtattgccagggcgtgtcgcgattaacttatctcccgagcag
tttggcaacccacaacttatcgactttatggaaaagttactgcgcacgacagagctggat
ccaagctgtattacgtttgagctaacagaaagcgccgtaatgagcgacagtgaacataca
ttgcaaatgttaaacgccatcaaaaagctgggatttgccctgtcgattgatgactttgga
accgggtactcgtctctctcttacttagcccgcttccctattgatgagctcaaaatagac
cgcgcttttattagtgatattgacacactgcctaaacaagtaaccgttatcgaaaacatc
atcaacctgggtaaatccttagatttatccgtggtcgcggaaggggtcgaaacccatcag
caagcgacgttgctttcaaacctgcaatgtcactcgattcagggcttccacttttaccgc
ccgcaacctaaacacgaaattgaagagctctttgtacaaaatcgtcgtcacaagaattaa
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