Vibrio natriegens: PN96_02015
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Entry
PN96_02015 CDS
T04636
Name
(GenBank) exodeoxyribonuclease V subunit alpha
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
vna
Vibrio natriegens
Pathway
vna03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
vna00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
PN96_02015
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vna03400
]
PN96_02015
Enzymes [BR:
vna01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
PN96_02015
DNA repair and recombination proteins [BR:
vna03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
PN96_02015
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_19
AAA_30
RecD_N
UvrD_C_2
SH3_13
NAT10_TcmA_helicase
AAA_11
Viral_helicase1
SLFN-g3_helicase
UvrD-helicase
AAA_22
nSTAND3
AAA_16
UvrD_C
CbiA
DEAD
AAA_28
MukB
ResIII
TrwB_AAD_bind
DUF87
T2SSE
NTPase_1
AAA_7
SRP54
RNA_helicase
AAA
Motif
Other DBs
NCBI-ProteinID:
ALR14808
UniProt:
A0AAN0Y413
LinkDB
All DBs
Position
1:435634..437793
Genome browser
AA seq
719 aa
AA seq
DB search
MTTYNNLPSNQESLLGTLERLAHKGAIRQLDYQFARFLYAQTDGAQSESQSDGQALAFIA
GVVSSELGKGHICLPLFDAQGQPTDLASKLGLFGEAALTLNTQLQGNNWPQLLENSSLVG
AQGEALPLMFDGERLYLHRYWHYEVTLAEKLNQLGAAVSLQPQEFTRLSELLNHLFARQY
HFLFNAIAKATEAGNNNQVLRQQLVCDHLDVVASDALDWPAIDALLSHANKVQDLQPLDD
LVPLSACVNWQKVAAAVALTRRFAVISGGPGTGKTTTVTKLLAALIEQAAQEKNLTIKLV
APTGKAAARLTESIGKAVQELPVSPELKAKIPTESSTLHRLLGAIPNSAEFRHNKQNPLH
LDILVIDEASMVDLPMMYKVVDALPKHARLILLGDKDQLASVEAGAVLGDICSFHALGYG
KEQASAIAKLTGFDSLAHSSNSASSIADSLCMLQKSYRFDARSGIGQLAKAVNLGSAASV
DNVWARDFLDIEHFALSSQNYNQMMQTLVQEYGRYLKRIGQQEQDPNTGEPETLTRKAKA
VLDTFNQCRLLCAIREGDFGVAGLNQRIEKALAARKLIKVQDEIWYHGRPVMVTRNDHGL
GLYNGDIGICMRDDSEEEQRLKVFFELPDGSVKSVLPSRVPEHETAYAMTIHKSQGSEFD
YTLMILPPDFSPILTRELIYTGITRAKKRLALYAELNVLKRGIKVKTNRASGLVQRLAN
NT seq
2160 nt
NT seq
+upstream
nt +downstream
nt
atgacgacctataacaatcttccatcgaaccaagagagcctgctgggaacacttgaacgg
ttagcacacaaaggtgcgattcgtcagctcgactaccaatttgcacgctttctttacgct
caaactgatggtgcgcagagtgaatcacaatcagacggtcaggcactggcgtttatcgct
ggtgtcgtcagtagtgagcttggtaaaggacatatttgtttgcctctcttcgatgcgcaa
ggtcagccgactgatttggccagtaagttggggctgttcggtgaggcagcgttaacgctc
aatactcaactgcaaggtaataattggccccaattattggaaaattctagtttggttggc
gcacagggagaagcgttgccgctaatgttcgatggtgagcgtttgtatttacatcgttac
tggcactatgaagtgacactggcggaaaagctcaatcaactgggcgcggcggttagcttg
caaccgcaagaatttacgcgattatctgagctgcttaaccatctgtttgcgcgtcaatat
cattttctttttaacgcgattgccaaagccactgaagctggcaataacaaccaagttttg
cgtcagcaattggtgtgtgaccaccttgatgttgtcgcaagcgacgcgttggattggcca
gcgattgatgcacttttaagccacgccaataaagttcaggacttacaacctctggatgac
ctcgtgccactttctgcttgtgtaaactggcaaaaagtcgcggcagcagtcgcgctaacc
cgtcgctttgcggtgatttctggtggaccgggcaccggtaaaacgaccacggtaaccaaa
ttgcttgccgcgctgatagagcaggccgcacaagagaagaatctaaccatcaagctggtg
gctccgacgggtaaagctgctgcacgattaaccgagtcaattggcaaagcagtgcaagag
ttacccgtttctcctgagttaaaagccaaaatcccgactgaatcgagcaccttgcaccgt
ttgttgggcgcgatccctaatagcgcagagttccgtcataacaagcagaacccgctgcat
ctggatatcttagtgattgatgaagcgtcgatggtcgatttacccatgatgtacaaagtg
gtcgatgcattgcctaagcatgcgcgactgatcctgcttggtgataaagatcagctcgct
tcggtagaagcgggggcagtgttgggtgatatttgctcgttccatgctttgggttatggc
aaagagcaggcttcggctatcgcaaagctgaccggttttgactccttggcccacagtagt
aatagtgcatccagcattgctgatagtttgtgtatgctgcaaaagagttaccgatttgat
gctcgctcggggattggtcaattagcgaaagcggtgaacttaggttctgcggccagtgtg
gacaatgtctgggcgcgagactttttagatatcgaacattttgctctgagtagccaaaac
tacaatcagatgatgcagacgttggtacaagagtacggtcgttatctgaagcgtattggg
cagcaagagcaggatccaaatacgggagaacctgaaacgttaacccgaaaagcaaaagcg
gtgttagacacatttaaccagtgcagattgctttgtgcgatccgcgaaggtgactttggt
gtggctgggttaaaccagcgcatagagaaagcacttgcagcgcgtaagctgattaaggtg
caggatgagatttggtatcacggcagacctgtgatggttacgcgcaatgatcacggttta
ggtttgtataacggtgatattggtatttgtatgcgggatgacagcgaagaagagcagcgt
ttgaaagtctttttcgaactccctgatggtagtgttaagtcggtactgccaagccgagtg
ccagagcacgaaactgcctacgccatgacgatacataaatcgcagggcagtgagtttgat
tacaccttaatgattctgccgccagattttagcccgatattaacccgcgagctgatttac
acaggcatcacccgagcgaagaaacgtttggcgctttacgcggaactgaatgtgcttaaa
cggggaataaaggtgaaaactaaccgagccagtggattggtgcagcgactagccaactag
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