Vibrio natriegens: PN96_02335
Help
Entry
PN96_02335 CDS
T04636
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
vna
Vibrio natriegens
Pathway
vna03030
DNA replication
vna03430
Mismatch repair
vna03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
vna00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PN96_02335 (dnaE)
03430 Mismatch repair
PN96_02335 (dnaE)
03440 Homologous recombination
PN96_02335 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vna03032
]
PN96_02335 (dnaE)
03400 DNA repair and recombination proteins [BR:
vna03400
]
PN96_02335 (dnaE)
Enzymes [BR:
vna01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PN96_02335 (dnaE)
DNA replication proteins [BR:
vna03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
PN96_02335 (dnaE)
DNA repair and recombination proteins [BR:
vna03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
PN96_02335 (dnaE)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
DNA_pol_IIIA_C
tRNA_anti-codon
tRNA_anti_2
Motif
Other DBs
NCBI-ProteinID:
ALR14870
UniProt:
A0AAN1CWH5
LinkDB
All DBs
Position
1:499581..503060
Genome browser
AA seq
1159 aa
AA seq
DB search
MSDPKFIHLRVHSDFSMVDGISKVPPIVKKVAELGMPAMALTDFTNLCGLVKFYGTAHGC
GVKPIIGADFKMQSDEFGEELTQLTVLAADNVGYKNLTLLISKAYLRGHIQHQPVIDKSW
LAEMSEGLIVLSGGKNGDIGKALLKGNRNLVQSCVEFYKQHFPDRYYLELLRTGRPDEET
YLHFAVELAEQVDLPVVATNEVVFLSSDLFDAHEIRVAIHDGYTLEDPRRPKNYSPQQYL
RSEEEMCELFADIPEALENSVEIAKRCNVTVRLGEYFLPAFPTEGMKETEFLVMKSREGL
EERLEFLFPDEEERKKRRPEYDERLQIELDVINQMGFPGYFLIVMEFIQWSKDNDIPVGP
GRGSGAGSLVAYALKITDLDPLEYDLLFERFLNPERVSMPDFDVDFCMDKRDQVIDHVAE
MYGRDAVSQIITFGTMAAKAVIRDVGRVLGHPFGFVDRISKLIPPDPGMTLDKAFKAEPA
LPELYEADEEVKELIDMCHILEGCTRNAGKHAGGVVISPTTITDFAPIYADSEGHFPVTQ
FDKNDVETAGLVKFDFLGLRTLTIIDWALGLINPRLEREGKAPVRIESIPLDDQASFRLL
QNSETTAVFQLESRGMKELIKRLQPDCFEDIIALVALFRPGPLQSGMVDNFIDRKHGREA
ISYPDEKWQHESLKEILDPTYGIILYQEQVMQIAQVLSGYTLGGADMLRRAMGKKKPEEM
AKQRATFEEGAVKNGVDGELAMKIFDLVEKFAGYGFNKSHSAAYALVSYQTLWLKMHYPA
EFMAAVMTADMDNTEKVVGLVDECFRMKLTVLPPDINSGLYRFNVDENGAIVYGIGAIKG
VGEGPIDAILEARNKGGHFKDLFDFCARIDLKRVNKRVIEKLIYAGALDRLGPHRAAMMA
SLNDAVKAASQHHQAEAFGQADMFGVLTDAPEEVEHKYTQVPPWPEKVWLEGERETLGLY
LTGHPINAYLKELNKYTSCRLKDATPTRRDQSVTVAGLVIAARVMTTKRGTRIGIMTLDD
RSGRMEVMLFSDALDRYAELLEKDRILVVSGQVSFDDFNGGLKMSAREVMDLGSAREKYA
RGLSVSIDANQINDQFFEQFSRILEPHKAGTVPVNVYYQRADARARLTLGTEWRVTPSDT
LIDDLKQLLGTNQVELEFN
NT seq
3480 nt
NT seq
+upstream
nt +downstream
nt
atgtcagatcccaagttcattcaccttcgagttcacagtgatttttcgatggtggatggt
atcagcaaagttccaccgatagttaagaaagtcgccgagcttggcatgcctgcaatggca
ttgaccgatttcactaacctgtgtggtttggtgaagttttacggcacagcacatggctgc
ggtgtaaaaccgatcatcggtgcagatttcaaaatgcaatctgacgagttcggcgaggag
ctgacacagctaacagtactggcagccgataatgtcggttacaaaaacctgacgctgctt
atctccaaagcgtatttgcgtggccatatccagcatcagccagtaattgataagtcttgg
ttagccgagatgtcagaagggttaatcgttctttctggcggtaaaaatggtgatatcggc
aaagcgttactaaaaggtaaccgcaacttagtccagagctgtgtagaattttacaaacag
cactttccagatcgttattacctagaattactccgtactggccgtccggatgaagaaacc
tacttgcacttcgccgttgaactggcagagcaagtggatctgcctgttgttgcaacaaac
gaagtggtcttccttagttctgatttgtttgatgcccatgagattcgcgtagcgatccat
gatggctacacattagaagatcctcgcagaccaaaaaactacagcccacagcaatacctt
cgcagtgaggaggaaatgtgtgagctgtttgcggatattcctgaagcactggaaaacagt
gttgagatagccaagcgttgtaacgtcaccgttcgtttgggtgagtacttcctgcctgcg
ttcccaacggagggaatgaaagagactgaattcttggtcatgaagtctcgcgaaggtctg
gaagagcgtctggagttcctgtttccggatgaagaagaacgtaaaaagcgtcgtcctgaa
tatgatgaacgtttgcaaatcgagctggacgttatcaaccagatgggcttcccgggatac
ttcctgatcgtaatggagttcatccagtggtcgaaagacaatgatattcctgtaggtcca
gggcgtggttcgggtgcgggctctctggtggcatacgcactgaaaatcacagaccttgac
ccactagaatatgatcttctcttcgaacgtttcttgaacccagaacgtgtatccatgccc
gatttcgatgtcgacttctgtatggataaacgagatcaggtgattgatcacgtagcagaa
atgtacgggcgcgatgcggtatctcagatcattacctttggtacgatggctgccaaagcg
gtaattcgtgatgtgggccgtgttcttggtcatccgtttggttttgtcgaccgaatctcg
aagcttatcccgccagacccgggtatgacgctggataaagcattcaaagccgagccagca
cttcctgagctttatgaggcagatgaagaagttaaagagctcatcgacatgtgccacata
ttggaagggtgtacgcgaaacgcaggtaagcacgcgggtggtgtggttatttcaccaacc
acgattacggacttcgcgccaatttatgcggattcagaaggtcatttcccggtaacacag
tttgataagaacgacgttgaaactgcgggtttggttaagtttgacttccttggtcttcgt
acactgaccattattgactgggcgcttgggttgattaacccgcgtttagaacgtgaaggt
aaagcgccggttcgtatagaatctatcccgctcgacgatcaggcgtcgttccgtttgtta
caaaactcagaaaccaccgccgtattccagttggaatcgcgtggtatgaaagagcttatc
aagcgacttcagcccgactgttttgaagacattatcgcactggtggcacttttccgtccg
ggtccattgcaatcaggcatggtagataactttattgaccgtaaacacggtcgggaagcg
atctcttaccctgatgaaaagtggcaacacgagtcattaaaagagattctcgatccgact
tacggcattatcctttatcaggaacaggtaatgcagatcgcgcaggtactgtctggctac
acgcttggtggcgcggacatgcttcgtcgtgcgatgggtaagaagaagccggaagagatg
gccaagcagcgtgctaccttcgaggaaggcgcggtgaagaatggcgtcgacggcgagttg
gcgatgaaaatcttcgacttggtagaaaagttcgctggctacggctttaacaaatcgcac
tctgccgcatacgcattggtttcttaccaaacgttgtggctaaaaatgcattatccagca
gaatttatggctgcggtaatgacagccgatatggacaacactgagaaagtggttggtctg
gtcgacgaatgtttccgtatgaagcttaccgtactgccaccggacattaactcagggctg
tatcgctttaatgttgatgaaaacggcgctattgtttacggtatcggtgcgataaaaggc
gtgggtgaaggtccaattgatgcgattttggaagcgagaaacaaaggtggtcactttaaa
gacctgtttgatttctgtgctcgaatcgatctgaaacgtgtgaacaaacgtgtcattgaa
aaattgatttatgcaggtgccttagacagacttggtccacatcgtgctgcgatgatggca
tcactcaatgatgctgttaaagccgcaagccaacaccatcaggcagaggcatttggtcag
gcggatatgtttggtgtactgactgatgcacctgaagaagtggagcacaaatatacccag
gttccgccttggccggaaaaagtttggctagaaggtgaacgcgaaactcttggtttatat
ttgactgggcacccgattaacgcgtatttgaaggaactaaataaatacaccagttgtcga
ctaaaagacgcgacaccaacacgtcgtgatcaatcagtgacggttgctggtttagtcata
gccgctcgtgtgatgacaaccaagcgtggaacacgtattggtatcatgacattggatgac
cgaagtggtcgaatggaggtaatgctattctccgatgcgcttgatcggtatgctgaactt
ctcgaaaaagacagaattttggtcgtttcaggacaggtcagctttgatgacttcaatggt
ggccttaaaatgtcggcgcgtgaagttatggatctcggcagcgcgcgtgaaaaatacgct
cgtggtctgtcggtatcgattgatgcaaatcagatcaatgatcaattctttgagcagttc
agtcgtattttagaaccgcacaaagccggaaccgtacccgtcaatgtatactaccagcgt
gccgacgccagagcgcggttaacattgggcaccgagtggcgagtaacgccaagtgataca
ttaatagacgatttaaaacagttacttggaacaaaccaggtagaacttgaatttaactaa
DBGET
integrated database retrieval system
