Vibrio natriegens: PN96_02505
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Entry
PN96_02505 CDS
T04636
Name
(GenBank) succinyl-diaminopimelate desuccinylase
KO
K01439
succinyl-diaminopimelate desuccinylase [EC:
3.5.1.18
]
Organism
vna
Vibrio natriegens
Pathway
vna00300
Lysine biosynthesis
vna01100
Metabolic pathways
vna01120
Microbial metabolism in diverse environments
vna01230
Biosynthesis of amino acids
Module
vna_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
vna00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
PN96_02505
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
vna01002
]
PN96_02505
Enzymes [BR:
vna01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.18 succinyl-diaminopimelate desuccinylase
PN96_02505
Peptidases and inhibitors [BR:
vna01002
]
Metallo peptidases
Family M20
PN96_02505
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M20
M20_dimer
Peptidase_M28
Motif
Other DBs
NCBI-ProteinID:
ALR14904
UniProt:
A0AAN0Y3Y5
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All DBs
Position
1:complement(534981..536117)
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AA seq
378 aa
AA seq
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MTDSPVLALAKDLISRQSVTPEDAGCQDLMIERLKALGFEIEVMVFEDTTNFWARRGTEA
PLFAFAGHTDVVPAGKLEQWDTHPFEPTIIDGYLHGRGAADMKGSLAAMVVAVERFIAEN
PDHKGSIGFLITSDEEGPFINGTVRVVEALMERGENIDMCIVGEPSSTEIVGDVVKNGRR
GSITGDLTVKGTQGHVAYPHLANNPVHSSLLAIHELATTEWDKGNDYFPPTSFQIPNVSA
GTGASNVIPGEFNVQFNLRFSTELNNDTIVQRVTETLDKHALDYELNWTFNGDPFLTDTG
ALLDAVVAAVNEVNHTKPALLTTGGTSDGRFIARMGGQVVELGPVNATIHKVNECVKVDD
LEKLTDMYQNTLKHLLAK
NT seq
1137 nt
NT seq
+upstream
nt +downstream
nt
atgacagacagtccagtactggctcttgcgaaagacctaatcagcagacaatccgtaacg
cctgaagacgcgggctgccaggacttaatgatcgagcgactaaaagcgcttggttttgaa
attgaagtcatggtgtttgaagatacaaccaacttttgggctcgccgtggtaccgaagca
ccgctatttgcctttgctggccacactgacgtagtacctgcgggcaagcttgagcaatgg
gatacgcatccatttgagccaacaataatcgatggctacctgcacggtcgcggtgcggcg
gatatgaaaggctctctggcggcaatggttgtcgctgtggaacgttttattgcagagaac
cctgatcataaaggctctatcggctttttgattacttcagatgaagaagggcctttcatc
aacggtaccgttcgcgtggtagaagcgctgatggaacgtggtgaaaatattgatatgtgt
atcgtgggtgaaccttcaagtaccgagatcgttggtgatgtcgtgaaaaatggtcgccgt
ggttcaatcactggtgatctgacggttaaaggtactcagggacacgtggcttacccacat
ctggctaataaccctgttcactcttctctgttagccattcacgagttagcaacaacggaa
tgggataaaggtaacgactacttcccgccaaccagcttccagattccgaacgtgtcggca
ggtactggtgcttcaaacgtcattccgggcgagttcaatgttcaattcaacctgcgtttt
agcacagagctgaataacgacactattgttcaaagagtgacagaaacgctagacaagcat
gccctggactatgagctgaactggacgttcaacggtgacccattcttaaccgacacaggc
gcgttgctggatgccgtcgtcgcagcagtgaatgaagtaaaccacaccaaaccagcgcta
ctgacaactggcggaacttcggatggccgttttattgctcgaatgggtggccaagtcgtg
gaacttggtcctgtgaatgcaaccattcataaagtgaacgagtgcgtgaaagtcgatgac
ttagaaaagttaacggacatgtaccaaaatacgcttaagcatttattggcgaagtaa
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