Vibrio natriegens: PN96_03340
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Entry
PN96_03340 CDS
T04636
Symbol
oppD
Name
(GenBank) oligopeptide transporter ATP-binding component
KO
K15583
oligopeptide transport system ATP-binding protein
Organism
vna
Vibrio natriegens
Pathway
vna01501
beta-Lactam resistance
vna02010
ABC transporters
vna02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
vna00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
PN96_03340 (oppD)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
PN96_03340 (oppD)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
PN96_03340 (oppD)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vna02000
]
PN96_03340 (oppD)
Transporters [BR:
vna02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Oligopeptide transporter
PN96_03340 (oppD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
oligo_HPY
AAA_21
SMC_N
AAA_29
nSTAND1
DO-GTPase2
DUF87
Herpes_ori_bp
Motif
Other DBs
NCBI-ProteinID:
ALR15060
UniProt:
A0AAN0Y3E6
LinkDB
All DBs
Position
1:711911..712882
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AA seq
323 aa
AA seq
DB search
MSLLDVKDLRVEFTTQDGIVTAVNDLNFSLNQGETLGIVGESGSGKSQTVFAIMGLLAKN
GIISGSAKFEGKEILNLPEKELNKVRAEQIAMIFQDPMTSLNPYMKVSDQLMEVLMLHKG
MGKAEAFEESVRMLEAVKIPEARKRITMYPHEFSGGMRQRVMIAMALLCRPKLLIADEPT
TALDVTVQAQIMDLLNELKDEFNTAIIMITHDLGVVAGSCDKVLVMYAGRTMEYGTVDEI
FYNPSHPYAEGLLKAIPRLDTEGEILPTIPGNPPNLLRLPPGCPYQERCHRVMDRCKQEA
PILTPFGDGRQRACFSQWEAWKK
NT seq
972 nt
NT seq
+upstream
nt +downstream
nt
atgagcttattagatgtcaaagatctgcgcgtcgagtttaccactcaagatggtatcgta
accgcagtaaatgatttgaacttttctcttaaccagggtgaaaccttaggtatcgtaggt
gagtcaggttcaggtaaatctcaaaccgtattcgcaatcatgggtctactggctaaaaac
ggtatcatttctggtagcgcaaagtttgaaggcaaagagatcctgaacctgcctgaaaaa
gaacttaacaaagttcgagcagagcagatcgcgatgatcttccaagacccaatgacgtca
ctaaacccttatatgaaggtgagtgatcagctgatggaagtattgatgcttcacaaaggc
atgggtaaagcggaagcatttgaagaatcggtacgtatgcttgaagcggtgaaaattcca
gaagcccgcaagcgtattaccatgtatccgcacgagttttcaggcggtatgcgtcagcgt
gtaatgatcgcaatggcgctgttatgtcgtcctaaactgttgattgctgatgaaccgaca
acggcactagacgtaaccgttcaggcgcagatcatggatctgcttaacgaactgaaagac
gagtttaataccgcaatcatcatgatcacgcacgatctgggtgttgttgcgggttcttgt
gacaaagtattggttatgtacgctggccgtacaatggaatacggaacagttgatgaaatc
ttctacaatccgagccacccatacgcagaaggcctgctgaaggcgattcctcgtttagat
actgaaggtgagatcctgccaactattccgggcaacccaccaaacttacttcgcctacca
cctggctgtccttatcaggaacgttgccaccgtgtaatggaccgttgtaagcaagaagcg
ccaattctgacaccgtttggtgatggtcgtcagcgcgcatgtttttcgcagtgggaggct
tggaaaaaatga
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