Vibrio natriegens: PN96_03980
Help
Entry
PN96_03980 CDS
T04636
Symbol
sirA
Name
(GenBank) response regulator
KO
K07689
two-component system, NarL family, invasion response regulator UvrY
Organism
vna
Vibrio natriegens
Pathway
vna02020
Two-component system
vna05111
Biofilm formation - Vibrio cholerae
Brite
KEGG Orthology (KO) [BR:
vna00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
PN96_03980 (sirA)
09140 Cellular Processes
09145 Cellular community - prokaryotes
05111 Biofilm formation - Vibrio cholerae
PN96_03980 (sirA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
vna02022
]
PN96_03980 (sirA)
Two-component system [BR:
vna02022
]
NarL family
BarA-UvrY (central carbon metabolism)
PN96_03980 (sirA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Response_reg
GerE
Sigma70_r4_2
HTH_23
HTH_29
HTH_7
HTH_24
HTH_Mga
HTH_Tnp_ISL3
HTH_26
Terminase_5
HTH_5
HTH_28
cREC_REC
Motif
Other DBs
NCBI-ProteinID:
ALR15181
LinkDB
All DBs
Position
1:866290..866934
Genome browser
AA seq
214 aa
AA seq
DB search
MINVFLVDDHELVRTGIRRIIEDVRGMNVAGEADSGEEAVKWCRSNHADVVLMDMNMPGI
GGLEATKKILRVNPDVKIIVLTVHTENPFPTKVMQAGASGYLTKGAGPDEMVNAIRVVNS
GQRYISPEIAQQMALSQFSPASENPFKDLSERELQIMLMITKGQKVTDISEQLNLSPKTV
NSYRYRLFSKLDINGDVELTHLAIRHGMLDTETL
NT seq
645 nt
NT seq
+upstream
nt +downstream
nt
ttgataaatgttttccttgtagatgatcacgagctggttcgcacagggatacgacgtatt
attgaagacgtccgtggaatgaacgtagcaggagaagctgacagcggtgaagaggcagta
aaatggtgtcgcagtaatcatgctgacgtcgttttaatggacatgaacatgccaggaatc
ggtggcttagaagcgactaaaaagattcttcgcgtgaatcctgatgtaaaaatcatcgta
cttaccgttcatacagaaaatccgtttccaaccaaagtaatgcaggcgggtgcttctggt
tatttaaccaaaggtgcaggcccagacgagatggttaacgcgattcgtgtggtaaatagt
gggcagcgttacatctcaccagagattgcgcagcagatggcattgagtcaattctcacct
gcctctgaaaacccttttaaagatttatctgaacgtgaattgcaaatcatgttgatgatt
accaagggtcagaaagtcacggatatttctgaacaacttaacttgagtccaaaaacagtt
aacagttaccgctatagactgtttagcaaattggacattaatggcgacgttgagttaaca
cacttagcgattcgtcacggaatgctggacactgagacgctttag
DBGET
integrated database retrieval system