Vibrio natriegens: PN96_04115
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Entry
PN96_04115 CDS
T04636
Name
(GenBank) peptidase
KO
K21470
L,D-transpeptidase YcbB
Organism
vna
Vibrio natriegens
Brite
KEGG Orthology (KO) [BR:
vna00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
vna01002
]
PN96_04115
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
vna01011
]
PN96_04115
Peptidases and inhibitors [BR:
vna01002
]
Cysteine peptidases
Family C82
PN96_04115
Peptidoglycan biosynthesis and degradation proteins [BR:
vna01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
PN96_04115
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Gene cluster
GFIT
Motif
Pfam:
YkuD
PG_binding_1
Scaffold
HPPK
PG_binding_3
Motif
Other DBs
NCBI-ProteinID:
ALR15201
UniProt:
A0AAN0Y3C2
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All DBs
Position
1:897484..899025
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AA seq
513 aa
AA seq
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MTALLVPFCSFSTAVSLDDTSQVEQEGAVKQLSIEKMIHYPSVVEQLYQSTNYRLNWQNE
SDVEQFIFQLNVVALADVTKEFDNQLHRINQIKWQGDNLDFDLVMTDSLLMYLSYLEQLP
HEGVNWLFANKTQVDLPPPSIDTLSVLSNELTVGKLGQFLSSLRSPLQMDRDFNSAFSAL
SEHAQYQYPLYEQQGLLRLGDPITNKASLAERLAIVGVDVSYVDPNSARYDENLELAVKE
FQRIHGLKQDGVIGPNTIRWINFSPKQRLHLLALNAERSRIWAKERDNVVFVNVPGYQVT
YWHDGQPLFESKVVVGKSSRKTPIMTVNMDSVILNPTWNVPWKIMVKDIIPKVKSNPMYL
IHNNIQIIRSWTSREIIDPTTINWATVNPRTFPYRMRQASGSQNALGLYKFNMPNPQAIY
LHDTPSKNLFEQDRRAFSSGCVRVENADQLAELLFKTQGLEERFAKKRESARRSNTSVPL
GERIAVHIIYQTAWLEEGTLYYRDDIYSYDNQG
NT seq
1542 nt
NT seq
+upstream
nt +downstream
nt
atgacggcacttttagtgccgttttgcagcttttctaccgcagtttctcttgacgatact
tcacaagtggagcaagagggagcggttaagcagctctcaattgaaaaaatgatccactat
ccatctgtggtggagcaattgtaccagagcacaaactaccgtttgaactggcagaatgaa
agtgacgttgaacagttcatctttcagctgaatgttgtcgcgcttgcagacgtcactaaa
gagtttgataaccagctgcatagaatcaaccagatcaaatggcaaggtgacaacctcgac
tttgatttggtgatgacagattcattgctgatgtatttaagttacctggagcagttgcct
cacgaaggggttaactggctatttgccaataaaacgcaagttgatcttcctccgccgagt
atcgatacattatcggttcttagcaatgagctgactgttggtaagctgggtcagtttttg
tccagtttgcgttctccgctgcaaatggatcgagatttcaactcggctttttcagcctta
tctgagcacgcgcaataccaataccctttatacgagcaacaaggcttgcttcgtcttggc
gatccaataaccaataaagcctctttggcagagcgccttgcgatagtgggcgtggatgtc
agctatgttgacccaaattcggcgcgatatgatgagaaccttgaactggctgtaaaagaa
tttcagcgtattcatggtttgaagcaagacggcgttatcgggccaaatacgatccgttgg
attaacttttctcctaagcagaggctgcatttgcttgctttaaatgctgagcgctcaaga
atatgggcgaaagagagagataatgtcgtattcgtcaatgtgccagggtatcaagttaca
tactggcatgatggacagccactgtttgagtcgaaagtcgtggttggtaagagttcaaga
aagacgccgataatgacggtcaatatggattcggttattttgaatccaacatggaatgtg
ccatggaagatcatggtcaaagacatcattcctaaagtaaaaagcaacccaatgtatttg
attcacaataacattcaaatcattcgatcttggacttcacgagagatcatcgatcctacc
actatcaattgggcgacggttaatcctcgaactttcccataccgaatgcgtcaggcatcg
ggttcacaaaatgcgttgggcttgtataagttcaacatgccaaacccgcaggccatttat
ttacacgatacgccaagtaaaaacttgtttgagcaagatcgtcgagcattcagttctggt
tgtgttcgcgtggaaaatgccgatcaattagctgaactgcttttcaaaacgcaggggctg
gaagagcgtttcgcgaaaaaacgcgaaagtgcccgtcgttctaatacgtcggttccttta
ggcgagcgtattgcggtccacatcatctaccaaactgcgtggttagaagaaggtacgctg
tattaccgtgatgatatttattcttacgataatcaagggtag
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