Vibrio natriegens: PN96_04180
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Entry
PN96_04180 CDS
T04636
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
vna
Vibrio natriegens
Pathway
vna03030
DNA replication
vna03430
Mismatch repair
vna03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
vna00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PN96_04180
03430 Mismatch repair
PN96_04180
03440 Homologous recombination
PN96_04180
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vna03032
]
PN96_04180
03400 DNA repair and recombination proteins [BR:
vna03400
]
PN96_04180
Enzymes [BR:
vna01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PN96_04180
DNA replication proteins [BR:
vna03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
PN96_04180
DNA repair and recombination proteins [BR:
vna03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
PN96_04180
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
RNase_H_2
CAF1
Motif
Other DBs
NCBI-ProteinID:
ALR15212
UniProt:
A0AAN1CW61
LinkDB
All DBs
Position
1:complement(912275..912994)
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AA seq
239 aa
AA seq
DB search
MLKKLFQKPTIQWHTKFKQKVEMATDENLVAFYGTELPSPDTPISDVEFVALDLETTGLD
PDKNDIITIGLVPFNLKRIFLRNARHWKVRPKQKLDEDSVIIHGITHSELIDAPDLGDIL
NELLPCLSGKIVVVHYRRIEREFLDKALRDRINEGIEFPVLDTFQIEEDIQKKRPGSLWE
SLKGKKPESLRLAQSRRRYGLPDYTPHHALTDAIATAELLQAQIAHHYDESQAISEFWL
NT seq
720 nt
NT seq
+upstream
nt +downstream
nt
atgttaaaaaagctctttcaaaagccgactatccaatggcacacgaagtttaagcaaaaa
gtcgagatggcgacggatgaaaatctggtagccttttacggcactgaattaccatcgcca
gacacaccgatttcagacgttgagtttgtcgcactggatttagaaaccacgggcttagat
cctgataagaacgacatcattacgattgggctggtcccttttaacctgaagcgtatcttt
ttgcgtaatgctcgtcattggaaagtaagaccgaaacaaaagctggatgaagactctgtc
atcattcacggtattacccatagtgagctgattgatgcgcctgatttaggggatattctc
aatgaactgttgccctgtttaagcggtaagatcgtagtggtgcattatcgtcgcatagag
agggaatttctcgataaagcattgcgagatcgcatcaatgaaggcattgaatttccggta
ttggatactttccagatagaggaagacattcagaaaaagcgaccgggaagtctgtgggag
tcgttaaaaggcaagaaaccagaatcgttgcgattagctcaatcacgacgccgttatggc
ttgccggactatactcctcatcacgctctgactgatgcgatagctactgctgaactgctt
caggcacaaatcgcgcaccattacgatgaaagtcaagcaatcagcgaattctggctttag
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