Vibrio natriegens: PN96_04985
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Entry
PN96_04985 CDS
T04636
Name
(GenBank) XRE family transcriptional regulator
KO
K14056
HTH-type transcriptional regulator, repressor for puuD
Organism
vna
Vibrio natriegens
Brite
KEGG Orthology (KO) [BR:
vna00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vna03000
]
PN96_04985
Transcription factors [BR:
vna03000
]
Prokaryotic type
Helix-turn-helix
Other families
PN96_04985
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Gene cluster
GFIT
Motif
Pfam:
HTH_3
Cupin_2
HTH_31
HTH_19
HTH_26
HTH_37
Sigma70_r4
MqsA_antitoxin
AraC_binding
MPI_cupin_dom
MarR_2
HTH_24
HTH_25
Ectoine_synth
AraC_binding_2
Cupin_3
HTH_38
HTH_28
HTH_23
Motif
Other DBs
NCBI-ProteinID:
ALR15363
LinkDB
All DBs
Position
1:1068518..1069075
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AA seq
185 aa
AA seq
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MDNQEIGRNIVQLRKKHGLSQRELAERAGITHSAISSIENGKVSPSVSSLQKIVNVFSLS
LSEFFIFEQTQNDEVKVVVTPEELVEMGSETVSMKLVTNGTKEQVIGFLIEEYAPHGTTG
SAEIKHEGEEIGTVLEGEITLEYKGRSFVIKEGESYVIDTTQPHRFTNHTDKACRMISAH
TPTTF
NT seq
558 nt
NT seq
+upstream
nt +downstream
nt
atggacaatcaagagattggtagaaatattgttcagttaagaaaaaaacatggattgtca
caacgagaattagccgagcgagcgggcattactcacagtgctatttcatcgattgaaaat
ggcaaagtgagcccttcggttagctcgttgcaaaaaatagtgaacgtattttctttatct
ctgtcggagtttttcatttttgaacaaactcagaatgatgaagtgaaagttgtcgttacg
ccagaagagctggtcgaaatgggcagcgaaaccgtttcgatgaaactggtgaccaacggc
acgaaagagcaggtgattggattcctgatcgaagaatatgcaccacacggaacaacaggt
tcagctgaaataaaacacgaaggcgaagaaattggcacggtactagagggagaaatcact
ctcgaatacaaaggccgttcgttcgtcatcaaagaaggcgagtcgtacgttattgatacg
actcagccacacagatttacgaatcacacagacaaggcttgtcgaatgataagcgcgcat
acgccaaccacattctaa
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