Vibrio natriegens: PN96_08730
Help
Entry
PN96_08730 CDS
T04636
Name
(GenBank) DNA-binding protein
Organism
vna
Vibrio natriegens
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YobI-ATPase
AAA_16
AAA_5
AAA_22
AAA
AAA_29
DUF815
RRM_Rrp7
TniB
AAA_14
KAP_NTPase
AAA_28
CPT
AAA_7
Motif
Other DBs
NCBI-ProteinID:
ALR17245
LinkDB
All DBs
Position
1:complement(1915305..1918907)
Genome browser
AA seq
1200 aa
AA seq
DB search
MNKIITSFVRWLIKGLDKTVSWLEQKNASDMQSKFVDLAPTDDADKTGTYSEALRFATNN
SKISNIALTGPYGSGKSSIIQSFLKTYRRPVLHISLATFITEAETKVETVDRQEIERSIL
QQMLYGADANKLPLSRFKRIQSPGVGSIFKSLYILLGMFALWYVFQQREGVISGTYFKPI
ALENSVNLGFFVFATAFLWRILHHFYVASFGLSLKGISLKNVEIKPACDDESSILNRHLD
EIIYFFQETSYDLVIIEDLDRFDNTDIFVTLREINGLVNANSGVKRHIRFLYALRDDIFA
NTERTKFFEFIIPVIPIINSSNSIDMVLKIGARLALNEGLDRQFLREVSRYLNDLRLIQN
IFNEYSIYVDNLKTDGEYLLDANKLLAVLIYKNVYPRDFEKLHRGEGTLAAILNFQDELI
SHGEKKFRAEITSLEKQLDIAERQTPADLKELRQIYAMALIEMLPPYTISVGIEQNNQVA
TAQLTGFEKFEELIEARYIYSRNIHRQNSRLDVSALQDNVDQHKTYLQRKEEIEHKAEEN
KTKTLLAIRDLRPKVAGLRTAKFHEQLRLHGDHLREFFEEFGQNGELARFLLLEGYLDDT
YYQYTSLFHSGRLSPNDNKFLIKIRAFITPEPDFPIDNPNEVIAAMRDEDFGQSYALNIS
LVDALLSVQHRYQSQLERLLGYIMEEFSNCEDFFMAYYSSGSYVPKFLQQLANVWSDFVL
TVLSSPNSLVHVVQLIGGLTERSLKSISRDFEEFPVFVSENLSDILISSPELDPERLVCL
NFDVKDFEAIKDHFDIVNSMFEEGLFDLTLANIEFAYQAILGEEDITPLHTRNFTAIRAT
NSTVLIDRIESNFGNYLRNILLAIQTNTEEETSAILDVVRREEIDLNTIQEFLEQQTQQL
PTLEDVPDRLHSMLFSLTMIVPNWENCLFFMASEGFEAQSLVEYLDRDVVRSVILKQAVP
SDSDSKSIRSFLLNANSLSDISYKEYVRALPKSFTHFPEGIEPTKLIILIQEAKIEFCTD
SLNALNERELQVLFAANNIDTFLAGPEDFSLEDDFLEELLESDISQKNKIKVVELMDLHS
LVDLPERSALVGSIIVNSDANLPNIDGDITSALIKNSSPIATQISLFNKYHSHLSNDEVR
DVLVNLPKPYSEITRGYHTPRLKEAPENQALVSWLDSREIISSWKISDIFKEIKVNLYRS
NT seq
3603 nt
NT seq
+upstream
nt +downstream
nt
atgaataaaataattacctcatttgtacgttggctcatcaaggggcttgataaaacggtg
tcttggttggaacaaaaaaacgccagcgatatgcaatcgaagttcgtagatctagctccg
acagatgacgcggataaaacaggcacctactcagaagcgttacgatttgcaacgaataat
tctaaaatctcaaatatagccctgacgggcccttatggctcaggaaagagcagcattatt
caatcttttctgaagacgtatcgacggccagttcttcatatttctctcgcgactttcatt
accgaagctgaaacgaaggtagaaacggtggatcgtcaggagatcgagaggagtatttta
cagcagatgctttacggtgcggatgcaaacaaactcccgttatctcgctttaagagaatt
cagtcgcctggtgttgggtcgatctttaagtcactgtacattttgttggggatgttcgcg
ctttggtatgtgtttcagcagcgggagggagtcatcagcggtacttatttcaaacctatt
gcgttggaaaactctgtcaatttaggtttctttgtgtttgctacagcattcctctggcgg
atactgcatcacttctatgtcgcgagctttggtttgtcgctcaaggggatttcgctaaaa
aatgtagaaattaagcccgcgtgtgatgatgaatcctcaatactgaatcgtcatttagac
gagataatctactttttccaggaaactagttacgatcttgtaatcattgaggatctagac
cgattcgacaacacagatattttcgttacgttgcgtgaaattaacggtcttgttaacgca
aattcaggcgtaaaacgtcatattcgattcctatatgcactacgcgatgacatatttgcg
aacacagagcgaaccaagtttttcgaatttatcattccagttattccgatcatcaactca
tcgaactcaattgacatggtcttgaagattggagcgagacttgcgcttaacgaaggcctt
gatcgtcagtttcttagagaggtatcacgttatttaaacgatctacggttgattcaaaac
atctttaatgaatacagcatttatgtggataatttgaaaacagatggagaatacttgctc
gacgccaataaactccttgccgttttgatctacaaaaatgtttatccacgggatttcgaa
aaattacaccgaggcgaagggaccctcgccgcaatattgaatttccaagatgagttaata
agtcacggagaaaaaaaatttagagctgaaattacttcactcgaaaagcaacttgatatc
gctgaacgtcaaactcctgctgacttaaaagagttgcgtcaaatatatgcgatggctcta
attgagatgctgccaccatacactattagcgtgggtatcgagcaaaataatcaagtggct
actgcccagttgacaggctttgaaaagtttgaagagctgatcgaggctcgatatatctat
tctcgaaacattcatcgtcaaaatagtcgcttggatgtttctgcactccaagataatgta
gaccagcacaaaacttatcttcaacgcaaagaggagatagaacataaggcagaggaaaat
aaaaccaaaactctactagcaatacgagatcttagaccaaaggttgcagggcttagaact
gcgaaattccatgaacaattacgattgcatggcgaccatctacgggagtttttcgaggag
tttggtcagaatggagagcttgctcggtttctgctgttagaaggttatctggacgatacc
tattaccaatacacctcactttttcattctggtcgattgtctcccaacgacaataaattt
ctcattaaaatacgtgcatttattacgccagagccagattttcctattgataatccaaac
gaagttattgcggcgatgagagatgaggactttggacaaagttatgctttaaacatctcg
cttgttgacgctctgttgagtgttcaacaccgttaccaaagtcaattagagaggctttta
gggtacattatggaagagttttccaactgtgaagacttctttatggcttattacagcagc
gggagttatgtcccaaaatttctccaacagttagctaatgtctggagtgattttgtactg
actgtactttctagcccaaatagccttgtacatgttgttcagctgattggaggattaact
gaacgttcacttaaatccatttcaagagattttgaagaattccccgtttttgtatcagag
aatctctccgatattctgattagttcgcctgagcttgatccagagcggctcgtttgcctc
aattttgacgttaaagacttcgaagcaatcaaagaccactttgacattgtgaactcaatg
tttgaagaggggctttttgaccttacgttagcgaacatagagttcgcttatcaagcgata
ttgggagaggaagatatcaccccattgcatacaaggaacttcacggcaatacgtgcgacg
aacagtactgtcttgatagatcgaattgagagtaattttggcaattacttacgcaatatt
cttttggctatccaaactaatactgaagaagaaacatccgctattttggacgtagttcgc
cgtgaagagattgacctcaatacgatccaagagtttcttgagcaacagacgcaacaatta
ccgacgttagaagatgtacccgatagattacattctatgctcttcagtttaactatgatt
gtgccaaactgggaaaattgccttttctttatggcaagtgaaggttttgaagcacaaagc
ttggttgagtatctcgatcgagacgtcgttagatcggttatcctgaaacaagcggtcccc
agtgatagtgattcgaagtctatacgttcttttcttcttaacgcgaattctctttctgat
attagctacaaagaatatgtgcgagctttacccaagtcatttacacattttccagaaggg
attgaaccaacaaagcttataatattaattcaggaagcgaaaatcgaattttgtactgat
agtctaaacgcgctcaacgaaagagagttgcaagtattgtttgcggcaaataatatcgat
acatttctggctgggccagaagacttttcattagaagatgatttcttggaagaactgctt
gagtcggatatttcgcagaaaaacaagataaaagtcgtcgaactgatggatttacattcg
ttagttgatcttccagagcgttctgcacttgttggttcaatcatcgtcaattcagatgca
aatctaccaaacattgacggagatataactagtgctctgataaagaactcctctccaata
gcaacgcaaatttcactcttcaataaatatcactctcatttgagtaacgatgaagtacgt
gatgtattggtgaatctaccgaagccatattccgaaataacccgtggttaccatacgcca
agactaaaagaggcacctgagaatcaggcactggtctcctggctcgattctagggaaata
atttcctcttggaaaattagcgatatatttaaagaaataaaggtgaacctctatagatct
tga
DBGET
integrated database retrieval system
