Vibrio natriegens: PN96_08955
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Entry
PN96_08955 CDS
T04636
Name
(GenBank) transcriptional regulator HU subunit alpha
KO
K03530
DNA-binding protein HU-beta
Organism
vna
Vibrio natriegens
Brite
KEGG Orthology (KO) [BR:
vna00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vna03032
]
PN96_08955
03036 Chromosome and associated proteins [BR:
vna03036
]
PN96_08955
03400 DNA repair and recombination proteins [BR:
vna03400
]
PN96_08955
DNA replication proteins [BR:
vna03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
PN96_08955
Chromosome and associated proteins [BR:
vna03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
PN96_08955
DNA repair and recombination proteins [BR:
vna03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
PN96_08955
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_2
Arteri_nsp7a
ACP_syn_III_C
DUF7342
GTP_EFTU_D2
HU-CCDC81_euk_1
Nup214_FG
HU-DNA_bdg
Motif
Other DBs
NCBI-ProteinID:
ALR16103
UniProt:
A0AAN1CVZ1
LinkDB
All DBs
Position
1:complement(1962223..1962495)
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AA seq
90 aa
AA seq
DB search
MNKTQLVEQIAENADISKASAGRALDAFIEAVSGTLQTGDQVALVGFGTFSVRTRAARTG
RNPKTGEEIQIAEAKVPSFKAGKALKDSVN
NT seq
273 nt
NT seq
+upstream
nt +downstream
nt
gtgaataaaactcagttagttgaacaaatcgcagaaaatgcagatatttctaaagcgtca
gcaggtcgtgcactagatgcattcattgaagcagtaagcggtacgcttcaaacaggtgac
caagttgctctagttggtttcggtactttcagcgttcgtactcgcgctgcacgtactggt
cgtaatccaaaaactggtgaagaaatccaaatcgcagaagcaaaagtgccttcattcaaa
gctggtaaagcactaaaagattcagtgaactaa
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