Vibrio natriegens: PN96_09165
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Entry
PN96_09165 CDS
T04636
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
vna
Vibrio natriegens
Brite
KEGG Orthology (KO) [BR:
vna00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
vna03016
]
PN96_09165
Enzymes [BR:
vna01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
PN96_09165
Transfer RNA biogenesis [BR:
vna03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
PN96_09165
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GFIT
Motif
Pfam:
DNA_pol_A_exo1
RNAseD_HRDC_C
HRDC
Motif
Other DBs
NCBI-ProteinID:
ALR17252
UniProt:
A0AAN0Y569
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All DBs
Position
1:complement(2013491..2014609)
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AA seq
372 aa
AA seq
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MNYKIIIKNKDLEEVCAQARDADVVMLDTEFVRIRTFYPQLGLIQLFDGNNLSLIDPTEL
TDMSPFVELLKDTSVLKVLHACGEDLEVFQNAFGCTPFPMVDTQLMAAFLGHGLSTGFAT
LVEEYLGVELDKSESRTDWMARPLTQKQLDYAAADVHYLLPLYEILLDKVTEAGWWHAVQ
QESDLLVSKRIREVNEENAYLDIKGAWQLKPSELAILKPLATWRYRQAIKRDLALNFVFK
EGDLLTVARLGLTSFKKMEAEGIDIRAVNRHGAKIADIVKKAKQTPADEYPEKIERLMDY
PGYKQVFKNMKDIVKSASQKSGLATEFLASKKQINQLLSWVWKKDRDPARMPDVMQNWRL
ELIGEKMNKALK
NT seq
1119 nt
NT seq
+upstream
nt +downstream
nt
gtgaattataagattattattaaaaacaaagacctagaagaagtttgcgctcaagccaga
gacgcagatgtcgttatgctggatacggaatttgtacggatcagaactttctatccacag
ctaggtttgattcagcttttcgacggcaataatctttccttaatcgatccgacagaactg
acggacatgtcaccgtttgttgaacttttgaaagatacctcggtattaaaagttctgcat
gcatgtggtgaagatctcgaagtgttccagaatgcgtttggttgcacgccatttccgatg
gtcgatacccagcttatggcagcgtttcttgggcatgggctatcaactggctttgcaacg
ctagtggaagaatatctgggtgttgaactggataagagcgagtctcgcacagactggatg
gctcgcccgctgacgcaaaagcagcttgattatgctgcggctgacgtacactacttgctg
ccgctttacgaaattttgctcgataaagtcaccgaagctggctggtggcatgcggtgcag
caggagagcgatttactggtttcgaagcgtattcgtgaagtgaacgaagaaaatgcgtat
cttgatatcaaaggtgcatggcaactgaaaccgtcagagttggctatcttaaagccgttg
gccacttggcgttaccgtcaggcaatcaaacgtgacctcgctctgaactttgttttcaaa
gaaggggacttattaacggttgcccgccttggtttaacaagctttaagaaaatggaagcg
gaaggcattgatatccgagccgttaaccgtcacggtgcaaagattgctgatatcgttaaa
aaagccaagcagacacctgcggatgaataccctgagaaaattgaacgtcttatggactac
ccaggctataagcaggtcttcaagaacatgaaagatattgtgaaaagtgcatcacagaaa
tctggcttagcgactgagtttcttgcatctaaaaagcagatcaatcagttgcttagttgg
gtatggaaaaaggaccgtgatccagcaagaatgcctgatgtgatgcaaaactggcgtctt
gaacttatcggcgaaaaaatgaataaagcgcttaagtag
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