Vibrio natriegens: PN96_09955
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Entry
PN96_09955 CDS
T04636
Symbol
glyA
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
vna
Vibrio natriegens
Pathway
vna00260
Glycine, serine and threonine metabolism
vna00460
Cyanoamino acid metabolism
vna00630
Glyoxylate and dicarboxylate metabolism
vna00670
One carbon pool by folate
vna00680
Methane metabolism
vna01100
Metabolic pathways
vna01110
Biosynthesis of secondary metabolites
vna01120
Microbial metabolism in diverse environments
vna01200
Carbon metabolism
vna01230
Biosynthesis of amino acids
vna01240
Biosynthesis of cofactors
vna04981
Folate transport and metabolism
Module
vna_M00140
C1-unit interconversion, prokaryotes
Brite
KEGG Orthology (KO) [BR:
vna00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
PN96_09955 (glyA)
09102 Energy metabolism
00680 Methane metabolism
PN96_09955 (glyA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
PN96_09955 (glyA)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
PN96_09955 (glyA)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
PN96_09955 (glyA)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
PN96_09955 (glyA)
Enzymes [BR:
vna01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
PN96_09955 (glyA)
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GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
OKR_DC_1
DegT_DnrJ_EryC1
Motif
Other DBs
NCBI-ProteinID:
ALR16272
UniProt:
A0AAN0Y0X8
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Position
1:complement(2162431..2163681)
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AA seq
416 aa
AA seq
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MLKRDMNIADYDAELFAAIQEETLRQEEHIELIASENYTSPRVMEAQGSQLTNKYAEGYP
GKRYYGGCEYVDKAEQLAIDRACELFGCEYANVQPHSGSQANSAVYMALLNPGDTVLGMS
LAHGGHLTHGSPVNFSGKHYNVIPYGIDEAGQINYDEMEALAIEHKPKMIIGGFSAYSQI
VDWKRMREIADKVDAYLFVDMAHVAGLIAAGVYPTPVPYAHVVTTTTHKTLAGPRGGLIL
SNAGEDMYKKLNSAVFPGGQGGPLMHVIAGKAVAFKEAMEPEFKAYQARVVENAKAMVAQ
FQERGYKIVSNGTENHLFLVDLIDKNITGKEADAALGAANITVNKNSVPNDPRSPFVTSG
IRVGTPAITRRGFTVEDAKELANWMCDVLDNIDNEEVIEATKQKVLDICKRLPVYA
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atgcttaagcgtgatatgaacatcgcagattacgatgcggaactgttcgcagctatccag
gaagaaactcttcgccaggaagaacacattgaacttatcgcttctgaaaactacacaagc
ccacgtgtaatggaagctcaaggttctcagctaacgaacaaatacgctgaaggctaccca
ggcaagcgttactacggcggttgtgagtacgtagataaagcggaacaattagcaatcgat
cgtgcatgtgaactattcggttgtgaatacgcaaacgtacagcctcactctggttctcaa
gcaaacagcgcagtatacatggcgcttctgaacccaggcgatacagtattaggcatgagc
ctggcacacggtggtcacctgactcacggttcaccagtaaacttctctggtaagcactac
aacgttatcccttacggtatcgacgaagctggtcaaatcaactacgacgagatggaagcg
cttgcgattgagcacaagcctaagatgatcatcggtggtttctcagcttactctcaaatc
gttgattggaaacgcatgcgtgaaatcgcagacaaagttgatgcttacctattcgtagat
atggctcacgttgctggtcttatcgcagcaggcgtttacccaacaccagtaccatacgca
cacgttgtaacaacaacgacgcacaaaacactagcaggtccacgtggtggtcttatcctg
tctaacgctggcgaagacatgtacaaaaagctgaactcagctgttttccctggtggtcaa
ggtggtcctctaatgcacgttatcgctggtaaagctgtagcgttcaaagaagctatggaa
cctgaatttaaagcataccaagctcgcgttgttgaaaacgcgaaagcaatggttgctcag
ttccaagagcgcggttacaaaatcgtttctaacggtacagaaaaccacctgttcctagtt
gatctaatcgacaagaacattactggtaaagaagctgacgcagcactaggcgcagcgaac
atcacagtaaacaaaaactcagtaccaaatgacccacgtagcccattcgtaacgtctggt
atccgtgtaggtacgccagcaatcactcgccgtggcttcacagtagaagacgcaaaagag
ctagcgaactggatgtgtgacgttcttgataacatcgacaacgaagaagttatcgaagcg
acaaaacagaaagtgctagatatttgtaagcgtctaccagtttacgcataa
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