Vibrio natriegens: PN96_11845
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Entry
PN96_11845 CDS
T04636
Name
(GenBank) DEAD/DEAH box helicase
KO
K05591
ATP-dependent RNA helicase DbpA [EC:
5.6.2.6
]
Organism
vna
Vibrio natriegens
Brite
KEGG Orthology (KO) [BR:
vna00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
vna03009
]
PN96_11845
Enzymes [BR:
vna01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
PN96_11845
Ribosome biogenesis [BR:
vna03009
]
Prokaryotic type
rRNA helicases
PN96_11845
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
Cas3-like_C_2
CMS1
AAA_30
Helicase_C_2
ALMT
PRAI
Motif
Other DBs
NCBI-ProteinID:
ALR16624
UniProt:
A0AAN1CVH4
LinkDB
All DBs
Position
1:complement(2606724..2608103)
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AA seq
459 aa
AA seq
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MSKQTFDHVGLSPALLATLDSMNYTHMTPIQALSLPAILNQRDVIGQGKTGSGKTAAFGL
GVLSNLNVKRFRVQSLVLCPTRELADQVAKEIRTLGRGIHNIKVLTLCGGMPMGPQIGSL
EHGAHILVGTPGRILDHLEKGRIDLSELNTLVLDEADRMLDMGFQDALDAIIDAAPKKRQ
TLLFSATFPEKIEQIAQRIMQSPEMIKVESTHDTSSIAQYFYKVEGSEARDEALANLLLT
YQPESAVVFCNTKKEVQSVADELHHRGFSVIDLHGDLEQRERDQALVQFANKSVSILVAT
DVAARGLDVDNLDAVFNFELSRDPEVHVHRIGRTGRAGSKGLAFSFFGEKDGLRVARIEE
YLDMDILPATLPEKSKQQPYQAKMVTINIDGGKKQKVRPGDILGCLTGKNGIPGAQVGKI
HLFPMRAYVAVEKSAAKKALQTISTGKMKGRQFRARLLK
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
gtgagcaaacaaacttttgaccacgtagggctaagcccggcgttactcgcgacgcttgat
tcaatgaattacacccacatgacgccaattcaggcattaagcttgccggcgatcctgaac
cagcgtgatgtgattggtcagggtaaaactggctcgggcaaaaccgctgcgtttggtctt
ggggttttatctaacctaaatgtgaagcgattccgtgtgcagtctttggtgttatgtccc
acacgtgaactggctgatcaggtggcgaaagaaatccgcactttagggcgtggtatccat
aacattaaagttctgacattgtgtggcggtatgccaatgggaccacaaattggttcactg
gagcatggcgctcatattctggttggcactcctgggcgtattcttgatcaccttgagaaa
ggccgaattgatctttctgagctcaatacgctggtactggatgaggctgaccgcatgcta
gacatgggcttccaggatgcgctggacgctatcattgatgcagcgccgaaaaaacgtcaa
acgttgcttttcagtgccactttccctgaaaaaatcgagcaaattgcccaacgtatcatg
cagtcacctgagatgatcaaagtggaatcgacacacgatacctcgagcatcgcccagtat
ttctacaaagtcgaaggctcggaagcgcgtgatgaagcattggcaaaccttcttcttact
tatcaacctgaatctgcggttgtattctgtaacaccaaaaaagaagtgcagagtgtggcg
gatgagctgcatcaccgtggcttcagtgtgattgatcttcatggtgacttagaacagcgt
gagcgcgatcaggccttggttcagttcgcgaataagagcgtttctattctggttgcaaca
gacgttgcggcgcgcggcttggatgttgataacctggatgcagtatttaactttgaattg
tctcgcgacccagaagtacacgtgcatcgcattggtcgtacaggccgagcgggcagtaaa
ggtttggcgttcagcttctttggtgagaaagatggtttacgtgttgcacgtatcgaagaa
tatttagatatggatatccttcctgcgacattgccagagaaatcaaaacaacagccttac
caagcaaaaatggtgacgataaatatcgacggtggcaaaaaacaaaaagtgcgtccgggc
gatatcctaggctgtttaaccgggaaaaatggtattccgggagctcaagtgggcaaaatt
catttgttcccaatgcgtgcttatgtggcggtagagaagtctgcggcgaagaaagctctg
caaaccatcagcacgggtaagatgaaaggacgtcagttccgagctcgtcttcttaaataa
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