Vibrio natriegens: PN96_12015
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Entry
PN96_12015 CDS
T04636
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
vna
Vibrio natriegens
Pathway
vna03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
vna00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
PN96_12015
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vna03400
]
PN96_12015
Enzymes [BR:
vna01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
PN96_12015
DNA repair and recombination proteins [BR:
vna03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
PN96_12015
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
PriA_C
DEAD
ResIII
Helicase_C
Zn_ribbon_PriA
PriA-like_WH
AAA_30
Zot
AAA_19
Zn_ribbon_6
TrwB_AAD_bind
HypA
Motif
Other DBs
NCBI-ProteinID:
ALR16658
UniProt:
A0AAN0Y078
LinkDB
All DBs
Position
1:2625681..2627885
Genome browser
AA seq
734 aa
AA seq
DB search
MRPSIARVALPVPLDKQFDYAIPGHLFPIIGGRVSVPFGRQTLIGIVTAMVNHSDFPKEQ
LKPIKAVLDSQPIWSEKLYSLLTWCSHFYQYPLGDTLHNAMPAALRKGKPADFATLQEWQ
ITEAGKDKLMQGLDRRAVKQQKVLQILVDGAVPHQEFVEQEIASTVLKSVEEKGWIERIE
KMPTISNWPQQVENDVDKPKLNHEQALAIASVNSQSGFACYLLEGVTGSGKTEVYLNLIK
PVLEKGRQALVLVPEIGLTPQTINRFKHRFNVPVDVIHSGLNDTERLNAWLSARDKAAGI
IIGTRSALLTPFADLGIIIVDEEHDSSYKQQDSLRYHARDVAVMRAYKEQVPIVLGSATP
ALETLHNALTGKYHHLTLTQRAGSAVPTTNKVLDVKGQYLESGLSAPLIAEMRKHLKAGN
QVMLFLNRRGFSPALMCHECGWIAECKRCDAYYTFHQYSNEIRCHHCGSQQPVIHQCQGC
GSTQLVTVGVGTEQLEHQLAQLFPEYKAIRIDRDSTRRKGSLEDALESIRKGEYQILIGT
QMLAKGHHFPNVTLVALLDVDGSLYSSDFRASERLAQLFIQVAGRAGRASKPGEVILQTH
HPEHSLLQALLQKDYRHFAMTALEERKLAQLPPYSYLTLFKAEANQSEVVEDFLRQVRFT
LESHPLFDDTCMVLGPTPSPLAKRAGKYRWQLLLQTQHRSSMQKLLTSAKPAIELLPNAK
KVRWNLDIEPQDLS
NT seq
2205 nt
NT seq
+upstream
nt +downstream
nt
atgcgtccatccattgccagagtggcattacccgttccactcgacaaacagtttgattat
gccatcccggggcacctgttcccgatcattggtgggcgcgtttccgtaccttttggacgc
cagaccttaatcggtatcgttactgcgatggtgaatcactctgattttcctaaagagcag
cttaaaccaattaaagccgtattggactcacaacctatctggtcagaaaagctgtattca
ttgctcacatggtgtagccatttttatcagtatccattgggcgatacgcttcacaatgcg
atgccagccgcgctgagaaaaggaaaaccagccgattttgccaccttgcaggaatggcag
attaccgaagcgggtaaagacaaactgatgcaagggcttgatcgtcgggccgtgaagcaa
caaaaagttctgcaaatcctggtagacggagccgtaccgcaccaagaatttgtagagcaa
gagatcgcctcaacagtgctgaaatcggtcgaagagaaaggttggattgagcgaattgag
aagatgccaacgatttcaaactggcctcagcaagtcgaaaacgacgtcgacaaacccaaa
cttaaccatgagcaggcgttagctatcgccagcgtcaatagccaaagtggttttgcctgc
tatttattagagggcgtaacaggctctggtaagaccgaggtttacctcaatctgatcaag
ccggtgttggaaaaaggacgacaagcgttagttctggtaccagaaattggcctgacacca
caaactatcaaccgctttaagcaccgctttaacgtgccggttgatgttatccactcagga
ttgaatgataccgaacgtttaaacgcttggttatcggctcgtgataaagcggctggaatt
atcattgggacacgctccgccctactgacgccatttgccgatctcggcattattattgtc
gacgaagaacacgactcttcatataaacaacaagacagtttgcgctaccacgctcgtgat
gttgctgtaatgcgtgcgtacaaagagcaagtgcctattgtgttgggctctgcgactccg
gctcttgaaacgctgcacaatgcgttgacgggtaaatatcatcacctgacactaactcag
cgtgcaggctctgcggtgccgaccaccaataaagtgctcgacgttaaaggtcagtattta
gaaagcggattgtctgcgccgctgattgccgaaatgcgtaaacacctaaaagcaggcaat
caggtgatgctgtttcttaaccgccgaggtttctctcctgccctaatgtgccatgagtgt
ggctggatagccgagtgtaaacgctgtgatgcctactacaccttccatcaatacagtaac
gaaatacgctgccatcattgcggctcacagcagcctgtaattcatcagtgtcagggatgt
ggttccactcagttagtaacggtcggtgtcggcacagagcagttagagcatcaattggcg
caactcttcccagaatacaaagccattcgtatcgacagagacagcacccgccgcaaaggt
agcttagaagatgcccttgaatcgattcgtaaaggtgaataccagattctgattggtacg
caaatgcttgccaagggacaccacttccccaacgtaacgctggttgccttgttggatgtg
gatggctctttatacagcagtgatttccgggcatctgaacgcctcgcgcagcttttcatt
caggttgcggggcgggctggtcgagcaagtaaacctggtgaagtgattttgcagactcac
catcccgagcacagtttgttacaagctctcttgcaaaaagattaccgccactttgccatg
accgcattagaggagcggaagttagcgcaattgcctccctacagttacctgactctattt
aaagcagaggcaaaccaaagtgaggtagtcgaagacttcctgcgccaagttcgttttacg
ctggagtctcacccactatttgacgacacttgcatggtacttggcccgaccccctcacct
ttggctaaacgggcgggcaaatatcgctggcaactcttgctgcaaactcaacaccggtca
tcaatgcaaaagttattaaccagtgccaaacctgctattgagttgttacctaatgccaag
aaagtacgttggaatttagacatagaaccacaggatctcagctag
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