Vibrio natriegens: PN96_12225
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Entry
PN96_12225 CDS
T04636
Name
(GenBank) hypothetical protein
KO
K12990
rhamnosyltransferase [EC:2.4.1.-]
Organism
vna
Vibrio natriegens
Pathway
vna02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
vna00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
PN96_12225
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
vna01005
]
PN96_12225
Lipopolysaccharide biosynthesis proteins [BR:
vna01005
]
O-antigen repeat unit
PN96_12225
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glycos_transf_2
Glyco_tranf_2_3
NTP_transferase
Glyco_trans_2_3
Motif
Other DBs
NCBI-ProteinID:
ALR16697
UniProt:
A0AAN1CUI8
LinkDB
All DBs
Position
1:2671186..2672094
Genome browser
AA seq
302 aa
AA seq
DB search
MITSISRQDICAVIVLYRPSPSALEHAKRLSTRLPVIAIDNTEAGHQLSHTSFDFCHRYL
ANNQNLGIATALNIGIKLAKRQDKHWCLLLDQDSIIDDDFLDAINTYPSDSTNIAALTPI
YYAQNLDKYGDLIQVRSCSIHRIKLDDESTQKKAPFIPVSYAITSGSLVNLSIMDKVGLH
DEDLFIDFVDIEWGLRANNKGYQVLANTNAILIQQLGDKPIMLMNRRIVNHSATRHYYYF
RNVMLMLRKPHVPRVWKIYEFAKLPARFLLYSLFAHPRTKQCRSMLKGIWHGINNKKGIK
PQ
NT seq
909 nt
NT seq
+upstream
nt +downstream
nt
atgataacctccatttctcgacaagatatatgtgcagtcatagtgctgtaccgaccaagc
ccatcagctctagaacatgcgaaacgactcagtacgcgtttacctgtcatcgccatcgat
aatacagaagcgggacatcaactatcacacacgagctttgacttttgtcatcgctatttg
gctaataaccaaaatttaggcatagccaccgcgctaaacattgggataaagcttgctaaa
agacaagacaagcattggtgtttactccttgatcaagatagtattattgacgatgacttt
cttgatgcaataaatacctatccctcagattcaaccaatattgccgcgctaacccccatc
tactacgcacaaaacttagataagtatggtgatttgattcaggtgagatcttgttctatt
catcgtatcaagcttgacgacgaatcaacgcaaaaaaaagcaccttttatccccgtctca
tatgccataacctctggcagtttggttaacttatcaataatggacaaagtcggcttgcac
gacgaagacttatttattgactttgttgatattgagtgggggctaagagccaataacaaa
ggctatcaggttttagccaacaccaatgcgatactgattcagcagttaggtgataaaccg
atcatgctgatgaataggagaatagtgaatcactccgccactcggcattattactatttc
cgtaacgtgatgttgatgttgcgaaagccccacgttcctcgggtttggaaaatctatgag
tttgctaaactacctgctcgatttcttctttactcactatttgcacatccaagaaccaaa
cagtgtagatccatgctaaaaggaatatggcatggcataaacaacaaaaaaggtataaaa
ccacaatga
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