Vibrio natriegens: PN96_12370
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Entry
PN96_12370 CDS
T04636
Name
(GenBank) 3-deoxy-D-manno-octulosonic acid transferase
KO
K02527
3-deoxy-D-manno-octulosonic-acid transferase [EC:
2.4.99.12
2.4.99.13
2.4.99.14
2.4.99.15
]
Organism
vna
Vibrio natriegens
Pathway
vna00540
Lipopolysaccharide biosynthesis
vna01100
Metabolic pathways
Module
vna_M00060
KDO2-lipid A biosynthesis, Raetz pathway, LpxL-LpxM type
Brite
KEGG Orthology (KO) [BR:
vna00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
PN96_12370
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
vna01005
]
PN96_12370
Enzymes [BR:
vna01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.12 lipid IVA 3-deoxy-D-manno-octulosonic acid transferase
PN96_12370
2.4.99.13 (Kdo)-lipid IVA 3-deoxy-D-manno-octulosonic acid transferase
PN96_12370
2.4.99.14 (Kdo)2-lipid IVA (2-8) 3-deoxy-D-manno-octulosonic acid transferase
PN96_12370
2.4.99.15 (Kdo)3-lipid IVA (2-4) 3-deoxy-D-manno-octulosonic acid transferase
PN96_12370
Lipopolysaccharide biosynthesis proteins [BR:
vna01005
]
Lipid A
PN96_12370
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glycos_transf_N
Glycos_transf_1
Epimerase_2
Motif
Other DBs
NCBI-ProteinID:
ALR16724
UniProt:
A0AAN0Y0Y6
LinkDB
All DBs
Position
1:2704299..2705549
Genome browser
AA seq
416 aa
AA seq
DB search
MLIRLIYTLLLALASPILLFGLYKSKPNKPKFGPRWKEHFGITPKLNTDQRPIWIHAVSV
GESIAAAPLIKALKKQNPEQAILVTTTTGTGAEQVAKLGDLVEHRYMPIDFSFAVKGFLK
AVNPKQMLIIETELWPNTLNTVHKAGIPITVVNARLSEKSCRNYAKVQPLFNLLHPKLTQ
VLCQTESDSERFSRLGVDSNKLSVTGSIKFDIQISDDVKTKGKELRSVLGEHRPVWIAAS
THKGEDEQVLNAHKKLLESYPEALLILVPRHPERFDSVFELCQKHSLETIRRTSQSDVAE
STQVYLGDTMGEMLILIGAADVCFMGGSLIGDKVGGHNVLEPAALGVPVITGPSYFNFTE
IVASLSQTESLSIIEDSSQLAESITDIFFNPRKIANSALGATESPLAKTIQLLVKE
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atgttaattcgtctgatatatacgttactgctggcactagcgtcaccaattcttttgttt
ggtttgtataagagcaagccaaacaagcctaaatttggtccgcgctggaaagaacatttt
ggtatcacgcccaagctcaatactgatcaacgcccaatatggattcatgccgtatcggtt
ggtgaaagcatcgctgcggcaccgttaataaaagcattgaaaaagcagaatcctgaacag
gcgattttggttactacaacaaccggtaccggggctgagcaggtggcaaaattaggtgat
ttagttgaacaccgatatatgcctatcgactttagctttgcggtaaaaggctttttaaag
gctgtaaatccaaagcaaatgctgatcattgaaaccgagctttggccaaataccctgaac
acggtgcacaaagcggggattccaattactgtggtcaacgcccgtttatctgaaaagtca
tgccgaaactacgctaaagtgcagccgttgtttaaccttttgcatccaaaacttactcag
gtgttgtgccaaaccgaatcggattctgagcgtttttctcgcttgggcgtcgatagtaat
aagctatcagttactggctcaatcaagtttgatatccagatctcagacgacgtgaaaacg
aagggtaaagaattgcgctctgttcttggagaacacagacccgtttggatagcggcaagc
actcataagggcgaagatgaacaagtacttaacgcacataagaaactacttgaatcttat
ccagaagccttactgatcttagtccctcgccacccggagcgttttgatagcgtctttgaa
ctttgtcagaaacatagcttggaaaccattcgccgtacctcacagtcagacgtagctgaa
tcaactcaagtttacctcggcgataccatgggtgagatgttgattttaataggcgcagcc
gatgtctgctttatgggtgggagcctaattggtgataaagttggcggacacaacgttctg
gaaccagccgcacttggcgtgccagttattacagggccgagttactttaattttaccgaa
attgttgccagtttatctcaaactgaatctctaagtatcatcgaagatagctctcaatta
gcggaatccataactgatattttcttcaacccaaggaaaatcgctaactcagcgttaggt
gcaacagaaagccctcttgcgaaaaccatccagttacttgttaaggaataa
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