KEGG   Vibrio natriegens: PN96_12700
Entry
PN96_12700        CDS       T04636                                 
Name
(GenBank) general secretion pathway protein GspD
  KO
K02453  general secretion pathway protein D
Organism
vna  Vibrio natriegens
Pathway
vna03070  Bacterial secretion system
vna05111  Biofilm formation - Vibrio cholerae
Brite
KEGG Orthology (KO) [BR:vna00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    PN96_12700
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   05111 Biofilm formation - Vibrio cholerae
    PN96_12700
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:vna02044]
    PN96_12700
Secretion system [BR:vna02044]
 Type II secretion system
  General secretion pathway protein
   PN96_12700
SSDB
Motif
Pfam: Secretin Secretin_N type_II_gspD_N0 LUD_dom
Other DBs
NCBI-ProteinID: ALR16786
UniProt: A0AAN1CUG8
LinkDB
Position
1:complement(2772877..2774898)
AA seq 673 aa
MKHWLSKSAWLLAGSLLCAPGAIANEFSASFKGTDIQEFINIVGRNLEKTIIVDPSVRGK
IDVRSYDVLNEEQYYSFFLNVLEVYGYAVVEMDNGVLKVIKAKDSKTSAIPVLGDSSAQG
DSVITRVVAVRNVSVRELSPLLRQLIDNAGAGNVVHYDPANIILITGRAAVVNRLAEIIK
RVDQAGDKEIELVELRNASAAEMVRIVEALNKSTNQKSTPEFLEPKIVADDRTNAILISG
DPKVRARLKRLIRQLDVEMATKGNNRVVYLKNAKAEDLVEVLKGVSDNLQAEKQAGQGQR
ASAQRGEVVIAAHPATNALVLTAPPDIMMALQDVIAQLDIRRAQVLIEALIVEMSEGDGI
NLGVQWGSLETGAVIQYGSGAQIGEVMVGLEEAKNTTQTESYWDSDSSSWQTREYTEEGD
YSTLASALSGVNGAAMSIVMGDWTALINAVATDSNSNILSSPSITVMDNGEASFIVGEEV
PVITGSTAGSNNDNPFQTVDRKEVGIKLKVVPQINEGDSVQLNIEQEVSNVLGANGAVDV
RFAKRQLNTSVMVQDGQMLVLGGLVDERALESEAKVPLLGDIPVLGYLFKSTTTETQKRN
LMVFIKPTIIRDGMTADGITQRKYNFIRAEQLYKAEQGLKLMSDDKIPLMPEFGKDREHP
AEIQAFLDQMSMN
NT seq 2022 nt   +upstreamnt  +downstreamnt
gtgaaacattggttaagcaaaagtgcttggttattggcagggagcctactctgtgcccct
ggtgcgatagcaaatgaatttagtgccagctttaaaggcactgatattcaggaattcatt
aacatcgttggtcgtaatttagagaagaccatcattgtggatccatcggtacgcggaaaa
atcgacgtccgtagttatgacgtgctgaatgaagagcaatactacagctttttcctcaac
gtacttgaagtgtacggctacgcagttgtagaaatggacaatggcgtactgaaagttatt
aaagcgaaagactcgaagacttctgcaattcccgttttaggtgatagtagcgcgcaaggc
gacagcgttatcacccgagtcgtagctgtacgtaatgtatcggtacgtgaattatctcca
ttgctgcgtcagcttatcgacaatgccggtgctggtaacgtcgttcactatgatccagcc
aacatcattctgattacaggtcgtgcggcggtggtcaatcgtttggcagaaatcattaaa
cgtgttgaccaggcaggtgacaaagaaattgagctggtagaactgcgtaacgcgtctgca
gcagagatggtgcgtattgtggaagctttaaataaaagcactaaccagaaaagcacgcca
gaattcttagagcctaaaatcgtggctgatgatcgcaccaatgcgattcttatctcgggt
gaccctaaagtacgtgctcgtcttaaacgcttaatccgtcagcttgatgtagagatggca
acgaaaggcaataaccgagtggtttaccttaaaaacgctaaagcggaagatttagtcgaa
gtactgaaaggtgtctctgacaatctacaagcagaaaaacaagcaggtcaaggccaaaga
gcaagcgcgcagcgtggcgaagtagttattgcagctcacccggcaaccaatgcactcgta
ttgactgcgccgccagatatcatgatggctttgcaagatgttatcgcccagcttgatatc
cgccgagcacaggtattgattgaagcgctgattgttgaaatgtcggaaggtgatggtatt
aaccttggcgttcaatggggctcgctagagactggcgcagttattcagtacggttctggc
gcgcaaatcggcgaagtcatggtcggtctggaagaagcgaaaaacactacgcagacagaa
agctactgggatagcgattcaagtagctggcagacccgtgagtacaccgaagaaggtgat
tactcaacattggcatctgcattaagtggtgtaaacggcgcggctatgagcatcgtgatg
ggtgactggacagcactgattaacgcagtggcaacggattcaaactctaacatcctgtca
tctccaagcattacggtgatggataacggtgaagcgtcatttattgttggtgaagaagtg
ccggttattactggctcgactgctggctcaaacaacgacaacccattccagactgttgac
cgtaaagaagtgggtatcaaactgaaagtggtgccacaaattaacgaaggtgattctgtt
caactgaatatcgaacaagaagtatcgaacgttttaggtgctaatggtgcggtggacgtt
cgctttgccaagcgtcagttaaatacgtctgttatggttcaagatggtcagatgctagtg
ctgggtggcttggttgatgagcgagcactggaaagtgaagccaaagtacctctattgggt
gatattcccgttttaggttacttgttcaaatcaaccactacagaaacgcaaaaacgcaat
ctgatggtatttatcaaaccaacgattatccgtgatggaatgacggcggatggcatcact
cagcgtaagtacaactttattcgtgctgaacagctttacaaagcagagcaaggtttgaag
ctgatgtcggatgataagatcccactgatgcctgagtttggtaaggaccgtgagcatcca
gctgagatccaagcgtttcttgatcagatgagtatgaactaa

DBGET integrated database retrieval system