Vibrio natriegens: PN96_12970
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Entry
PN96_12970 CDS
T04636
Name
(GenBank) secretin
KO
K02280
pilus assembly protein CpaC
Organism
vna
Vibrio natriegens
Pathway
vna02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
vna00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
PN96_12970
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
vna02044
]
PN96_12970
02035 Bacterial motility proteins [BR:
vna02035
]
PN96_12970
Secretion system [BR:
vna02044
]
Type II secretion system
Tight adherence (Tad) export apparatus
PN96_12970
Bacterial motility proteins [BR:
vna02035
]
Pilus system
Pilus assembly proteins
PN96_12970
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Secretin
T2SS-T3SS_pil_N
CdsD_PD1
Ste5_C
Motif
Other DBs
NCBI-ProteinID:
ALR16833
UniProt:
A0AAN0Y0F4
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All DBs
Position
1:complement(2833491..2834915)
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AA seq
474 aa
AA seq
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MSLLRNFILCVSLVLSISPWAVAASHTLNLTINQNRLITVNDDVKDIFVSDPNLVVVHAP
SNRHVMVSGKALGETDILVLGDNARTLAHYKVVVAADLSQLERAVQHAFPDVQVTFVHSK
GAIVAMGEVANALQAHEILSMASGFAKGLQEVDEQTLAAPTSESSSSSGRGEGMAKPGGG
MGVYPLVVNQLKTAGSAQVNISVRIVEMERSTSEQLGLRWSSIGNMRWGTWDTLQTALGV
TPGNKFPTNNLPSGPGQHGLNVIIDALVEDSLVNVLAEPNLTAKSGEAATFMSGGEFPFP
VDNSDDGVSIEFKRFGISLELTPTVLSNKQISLTVAPEVSTLSREHSVSIAGVEVPGIES
RRATTTIELADGQSFALAGLVRTYQDHKIEALPFLGEIPFLAPLFSSNSFKNSESELVII
ATAHLVEPTSDPSELTTPLDRFRPANRFERLFLRDMGDDHDDSQRLFGNYGYNY
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atgtccttgcttcgaaattttatactttgcgtatcgctggttttgtctatctctccgtgg
gcggtagcagcaagtcataccttgaaccttactatcaatcaaaaccgtttgattacggtg
aatgatgatgtgaaagatatttttgtttctgacccgaacttagtcgtggttcacgcacct
tccaaccgtcacgtgatggtctctggtaaagcgttaggagaaaccgacattctggtactt
ggggacaatgctcgcacactcgcgcattacaaggttgtggttgctgctgatctgtctcaa
ctggaacgagccgtacaacacgcgtttcccgatgttcaagtgacgtttgttcatagtaag
ggagcgatcgttgctatgggtgaagtggccaatgcacttcaggcacatgagatcctgagc
atggcatctgggtttgccaaagggctacaagaggtagacgaacaaaccttagctgcgcca
acaagcgaaagtagcagtagctctggtcgcggtgaaggtatggcaaaaccgggtggtggc
atgggcgtctaccctttggttgttaaccagcttaaaaccgcgggtagcgctcaagtgaat
atttccgtgcgtattgttgaaatggaacgctcgaccagcgaacaacttggtttgcgttgg
agctctatcggtaatatgcgctggggtacatgggacacgttacagacggcactgggtgta
acgcctggtaataaattcccaaccaataatctgccatcaggccctggtcagcacggtctt
aatgtcatcatcgatgcattagttgaagacagtttagtaaacgttctcgctgagccgaat
ctgacggctaagtctggcgaggcggcgacctttatgtctggtggtgagtttccttttccc
gtcgacaacagtgatgacggtgtgagtattgagtttaaacgctttggtatttcattagag
ctgacgcctacagtcttgagtaataaacagatcagtctcacggttgctcccgaagtttct
actttgagccgcgagcacagcgtttctattgcgggtgtcgaagttccaggtattgaaagc
cgccgtgccaccacaacgattgaattggcagacggtcagagctttgcgctggcaggtctg
gtgagaacctatcaagaccacaaaatcgaggcgctgccgtttcttggagaaattcctttc
cttgcaccgcttttcagcagcaacagctttaaaaactcggaaagcgagttagtgattatc
gcgacagcacatttagtcgagccaaccagcgacccaagtgaattgaccacgccattagat
cgcttccgtcctgcgaatcgatttgaacgtttgttcttacgcgacatgggtgatgaccac
gatgatagccagcgtttgtttggtaactatggatacaactattaa
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