Vibrio natriegens: PN96_16005
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Entry
PN96_16005 CDS
T04636
Name
(GenBank) ligand-gated channel
KO
K16091
Fe(3+) dicitrate transport protein
Organism
vna
Vibrio natriegens
Brite
KEGG Orthology (KO) [BR:
vna00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vna02000
]
PN96_16005
Transporters [BR:
vna02000
]
Other transporters
Pores ion channels [TC:
1
]
PN96_16005
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
OMP_b-brl_3
Motif
Other DBs
NCBI-ProteinID:
ALR17496
LinkDB
All DBs
Position
2:complement(252385..254526)
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AA seq
713 aa
AA seq
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MSYIMKRNERMNKMLTMHPLAIAIVSSLASTTMVSQASASPSEVNTTAMETVVVTGSVIG
NSEIEDVKEYPGARTIITSDQIKKTAASSIDGALQSVPGIKVQDETGTGVLPNISVRGLN
ASRSGHAQMLMDGVPLTLAPYGHTGQSIFPATLSMVERIDIVRGGAAVQYGPNNVGGVIN
LVTKPIPHTWQTEISNRLTVFEGGDTPLNDFYLRTGGWLSDTFALQLEGNFLKGESFREH
SDTDVKNFQAKVQWLLSDTQELQAFIQRYEADTQMPGALSPEDYQQDREQSKRQYDEYQG
ESTRWSVKYIHDLAFADSAELELLTFGHQSERFFQWGFNSAGGHWADPALPSTDIRTSPR
EFTVYGIEPKLAMYFGEGQSVTQNWIIGARYVNEDIDYKLTQTPLSGGNTNVPRDWHLDT
DAFAGYISNEIGLFNDTLKITPGLRFESVDMSFDDLGKEQSADNKVTEWLPGLTLAYSLN
EQWVTYANAQKSLRAPQIAYIRGLGEEGSELAWNYEVGARFTQNETSFNAAIYRIDFEDQ
LQWQSATQTFDNIGKTLHQGIELSARYVPESLPLLSLGASYNYLDATLEEDGENKGNQLA
FSSKHQLGWDATYVFSGVDTTLSGFYFSDAYTDNANTSSEDSTGATGKVPSYMVWNFNLG
TDLYKDEKGKLRMNVAVNNLFDEDYYFRGIDTSPVGRYPAPGRSYTLDLNYQF
NT seq
2142 nt
NT seq
+upstream
nt +downstream
nt
atgtcatatataatgaaacggaatgaacgaatgaacaaaatgttgaccatgcatcctttg
gctattgcgatagtgtcctcgctagcttcaacaacgatggtatctcaggcaagtgcttca
ccttctgaagtcaatacgacagcaatggaaaccgttgttgttacgggtagcgtgataggt
aattctgaaattgaagatgttaaagaatatccaggcgcacgaaccatcatcaccagtgat
caaatcaaaaaaacggcggcaagttcgattgatggcgcgctgcaaagtgttcctggtatc
aaagttcaggatgaaaccggaacgggagtcctacccaacatttcagtgcgtggtttaaat
gcgagtcgcagtggtcatgctcaaatgctcatggatggtgttcccctaaccctcgcacca
tatggccatactggtcagtctattttcccagcgacgttgtccatggttgaacgaattgac
attgttcgcggcggagcggcggttcagtacggaccaaacaacgtaggtggcgtgatcaac
ttagtcaccaaaccgattccccacacttggcagacggagatcagtaatcgtctgacagta
tttgaaggcggagatacaccgctcaacgatttctacctgagaactggggggtggttaagt
gatactttcgctttgcaattggaaggtaactttttaaaaggtgagagcttccgtgaacat
tcagatacggatgtgaaaaatttccaagccaaagttcagtggttacttagtgatacgcaa
gagcttcaggcatttattcaacgttatgaagcagacactcaaatgccgggtgcactttct
cctgaagattatcagcaagaccgtgagcagtcgaaacgccaatacgatgagtatcagggt
gaatcgacgcgttggagcgtaaaatacattcacgatttagcctttgcagacagtgctgaa
cttgagttactcacctttggtcatcaatctgagcgttttttccagtggggctttaatagt
gctggtgggcactgggctgatcccgctttgccgtccactgatattcgtacctcacctcgc
gaatttactgtgtatggtatcgagccgaaattagcaatgtattttggtgaaggtcagtcc
gttactcaaaactggattattggtgctcgttacgtaaacgaagatatcgactacaaactt
acgcaaacgcctctctctggaggtaacaccaatgttccgcgtgactggcacttagatacc
gacgcgtttgcgggttacatcagcaatgaaattggtctattcaacgatacactcaaaatc
acgcctggattgcgttttgaatcggttgatatgagctttgacgatcttggaaaagagcaa
agtgcagataataaagtgacggagtggttacccggtttgacgctggcttatagtctcaat
gaacagtgggtcacgtacgcaaatgcgcaaaaatctctgcgtgcacctcagattgcttac
attcgaggcttgggtgaagagggcagtgagttggcgtggaactacgaagtgggcgcgcgt
tttactcagaacgagacaagtttcaacgctgcgatttaccgcattgatttcgaggatcaa
ctgcaatggcaaagcgcgacgcaaacttttgacaacattggtaaaacgctgcatcagggt
attgaactgtcagctcgatatgttcccgagtcattaccgttactcagcctgggtgcaagc
tacaactacttagatgccacactcgaagaagacggtgagaacaaagggaatcagctagcg
ttctcttccaagcaccaacttggctgggatgcgacttatgtcttctctggcgtagatacc
actttatctggtttctatttcagcgatgcgtacaccgataacgccaacactagctctgaa
gatagtacgggagcgactggtaaagtaccgtcttatatggtctggaactttaacttaggt
acggacttatacaaggatgaaaaaggtaagctgcgcatgaatgtcgccgtgaacaatctg
tttgatgaagattattacttccgcggaatcgatactagccctgttggtcgctacccagca
cctggacgctcatacacgcttgatctgaactaccagttttag
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