Vibrio natriegens: PN96_18485
Help
Entry
PN96_18485 CDS
T04636
Name
(GenBank) transcriptional regulator
KO
K16516
LysR family transcriptional regulator, regulator for genes of the gallate degradation pathway
Organism
vna
Vibrio natriegens
Brite
KEGG Orthology (KO) [BR:
vna00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vna03000
]
PN96_18485
Transcription factors [BR:
vna03000
]
Prokaryotic type
Helix-turn-helix
LysR family
PN96_18485
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
HTH_29
HTH_23
Motif
Other DBs
NCBI-ProteinID:
ALR17948
UniProt:
A0AAN1CY24
LinkDB
All DBs
Position
2:complement(802129..803346)
Genome browser
AA seq
405 aa
AA seq
DB search
MFNIPNIRHLRAISEVVKTGSISKASETVFLSQPAITQAISKFEKSIHSELFERTSDGMT
PTPQGKAFAFRIDRALDHIEHGISETLKIAKGQRKSNVHRFLYNMTSTHLKALVAVSDGQ
GFTEASRLLEVSQSSVYRASKDLEEILDVTLFEKISNGIVVSKAGTALVKACKLAFVEIK
QGIEEIDALSDRHNSVITVGCLPLARTCLLPITINEFSQSYPDCRIQVIDGPYSDLLNHL
KYGEIDVLIGALRFPIPSTDIRQETLFESENKVFARHDHPLSKKANVTLQDLHQASWVVS
SANTPGRKMFEDIFINGGLEPPSRLVEASSQMLVKELILGSDRLSVLSQHQIQRELDEGH
FTILPFDCSQQSRPIGLTMRKNWYATTVQTHFVSLLRKNGLKMSG
NT seq
1218 nt
NT seq
+upstream
nt +downstream
nt
atgtttaacatcccaaatattcggcacttacgcgccatttctgaagttgtcaagacaggc
agcatcagtaaggcatctgagaccgtatttctctcccaaccagccatcactcaagcgatt
tcaaaattcgaaaagagtattcacagtgaactatttgaacgtaccagtgatggcatgacg
ccgactccgcaaggtaaagctttcgcgtttcgtattgatagggcgttagatcatatagag
catgggatctctgagacactcaagatcgccaaagggcaacgcaaaagcaacgttcatcga
ttcttatacaatatgacgtcgacacacctgaaggcgttagttgccgtttcggatggtcag
ggttttaccgaagccagccgcttgttggaggtgtcccaatcttccgtttaccgcgcgtca
aaagatcttgaagagatcttggatgtcaccttattcgaaaaaatcagtaatggtatcgtc
gtaagcaaagccggtaccgcgctcgtcaaagcttgtaagctcgcatttgttgaaataaag
caaggaatcgaagagatcgacgcacttagcgaccgtcataacagtgtgatcacagtgggc
tgtctgccgctagctcgtacctgtttgctacctattactattaatgaattcagccaaagc
tatccagactgccggattcaggttatcgatggcccctactccgatttgctcaaccactta
aagtacggtgagatcgatgtactgatcggcgcattgcgatttccgattccgagtactgat
attcgtcaggaaaccctgtttgaatcagaaaacaaagtctttgcacgccacgatcacccg
ctatccaaaaaagcgaatgtcactctgcaggatttacatcaagccagttgggtagtctcc
agtgctaatacgccaggacgcaagatgtttgaagacatcttcattaatggtggattagag
cccccttcacgtttggtagaagccagttcgcagatgcttgtaaaagaactgatactgggc
agcgatcgcctgtctgtcctttctcaacatcaaattcaacgtgaactggacgaaggccac
tttacgattttaccttttgattgcagccagcagtctagaccgattggccttaccatgcgt
aagaactggtacgcgactaccgtacagacgcatttcgtatcgcttctgcgtaagaatggc
ttgaagatgtcaggctaa
DBGET
integrated database retrieval system