Vibrio natriegens: PN96_20115
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Entry
PN96_20115 CDS
T04636
Name
(GenBank) exonuclease SbcD
KO
K03547
DNA repair protein SbcD/Mre11
Organism
vna
Vibrio natriegens
Brite
KEGG Orthology (KO) [BR:
vna00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vna03400
]
PN96_20115
DNA repair and recombination proteins [BR:
vna03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
PN96_20115
Archaeal homologous recombinant proteins
PN96_20115
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Gene cluster
GFIT
Motif
Pfam:
Metallophos
SbcD_C
Metallophos_2
B12-binding
Metallophos_3
Motif
Other DBs
NCBI-ProteinID:
ALR18241
UniProt:
A0AAN0Y5E4
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Position
2:1189144..1190277
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AA seq
377 aa
AA seq
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MKFIHTSDWHLGRQFHNVSLLDDQQAVLEQLISYIEDNPVDAVVVAGDVYDRSVPPTVAI
ELLNRVVKRICTELKTPMILISGNHDGAERLGFGSEQMKNSGLHIISNFEDMLSPVVITT
KAAGEVALYGMPYNDPEQVRFAYKESVSTHDEAHKLLVEKITEQFQPQQRRVLISHCFVD
GAIESDSERPLSIGGSDRVSHEHFLDFDYVALGHLHQPQKKGEEYIRYSGSLMKYSFGEQ
NQKKGFTLVEINESGFASAEHIELTAPHEMRIIEGDLEQVIEKGKTDPKSEDYLLVRLMD
KHAILNPMEKLRAVYPNVLHLEKPGMLIGVEQEMAQAKLARSEIDMFRDFFSEAQDSQLS
QEQERAVNDIIKQLSQL
NT seq
1134 nt
NT seq
+upstream
nt +downstream
nt
atgaagtttatccatacctcagattggcacctaggccgacagttccacaacgtttcatta
ctcgatgatcagcaagcggttctcgaacaattgatctcctacattgaagacaacccagtc
gacgcagtcgtcgtggcgggagatgtgtatgaccgctctgttccacctacggttgccatc
gaacttttgaatcgtgtggtaaaacgaatttgtactgagctgaaaacaccgatgattttg
atttctggtaatcacgatggtgcagagcgtttggggtttggctctgaacagatgaaaaac
tcgggtttgcatatcatcagtaactttgaagatatgctttcgcctgtggtgattacgacc
aaagcggctggtgaggtggcactttacggcatgccttataacgatcctgagcaggtcagg
tttgcctataaagaatcggtttcgacccatgatgaagcgcacaaactgcttgttgaaaaa
attacagagcagtttcaaccgcagcaaagaagagtgcttatcagccactgtttcgttgat
ggggcgattgagtctgactcggaacgcccgctttctattggtggttctgatcgtgtaagc
catgagcacttcctggatttcgactatgtcgcacttggccatttacatcagccgcagaag
aagggtgaagaatacattcgttactctggctctttgatgaaatacagttttggtgaacag
aaccaaaagaaaggtttcactctggtggaaatcaacgagagtggttttgcgtctgctgag
catattgagctgaccgctccgcatgagatgcgaattattgaaggtgatttagagcaggtc
atcgagaaaggaaaaacggacccgaaaagcgaggactatctactcgttcgtctgatggat
aaacatgccattttaaatccgatggaaaaacttcgtgcggtctacccaaatgttttgcac
ctagagaaaccgggcatgttgatcggggttgaacaggagatggcacaagccaaacttgct
cgcagtgaaatcgatatgttccgcgacttctttagtgaagcgcaggacagtcagttgtcg
caagaacaagagcgagccgtcaacgatattatcaagcaattatctcagctgtaa
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