Vibrio natriegens: PN96_21590
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Entry
PN96_21590 CDS
T04636
Name
(GenBank) exoribonuclease II
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
vna
Vibrio natriegens
Brite
KEGG Orthology (KO) [BR:
vna00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
vna03016
]
PN96_21590
Enzymes [BR:
vna01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
PN96_21590
Transfer RNA biogenesis [BR:
vna03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
PN96_21590
BRITE hierarchy
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GFIT
Motif
Pfam:
RNB
OB_RNB
S1
CSD2
S1CSD-TOTE-2
Motif
Other DBs
NCBI-ProteinID:
ALR18511
UniProt:
A0AAN1CXB1
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All DBs
Position
2:1531176..1533176
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AA seq
666 aa
AA seq
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MFQDNPLLAQLKQQIQENLPKKEGSIKATDKGFGFLEVDSKTSFFIPPAYMKKCIHGDKV
VAIIRTENEREVAEPQELLEQSLTRFIGRVKMFKGKLNVVPDHPQLKKLSLKAKLKKGQK
PDNFNEGDWVVGHLIRHPLKGDNSFFVEISEKITDADDKIAPWWVTLAQNDLPNSEPAGI
ENWELKDDAELDRVDLTHVPFVTIDGESTKDMDDALHAKKTESGDFELTIAIADPTAYIT
PEDEMDKVARERGYTIYLPGRNIPMLPRDLADDLCSLIEGETRPALCCTVSVSKDGVIGD
NINFFAANIKSHARLAYDHVSDWIENGSSDKWQPSEDIATIVRDLYDFSVARADWREKNA
VVFPDRPDYRFELSEDNDVIAIHADMRRSANRLVEESMITANICAGRTLRDKFETGVFNT
HSGLKAEKIEEVVQLVDPEGTHGFTADTIATLEGFAALRRWLSTQETSYLDNRIRKFQAY
SEVGNQPLPHYAMGLDIYATWTSPIRKYGDMINHRMLKAVILDKEPVQKPDDQVGEELAL
HRKHHKIAERNVSDWLYARTLAEEPSKQTRYIGEIFDINRAGARVRLLENGAAAFIPGSL
IVDNKERIECNGDNGTISIDKEVVYKLGDTLEVVLADVNQENRSLVAKPTQVFAEPPKAQ
TEQTVE
NT seq
2001 nt
NT seq
+upstream
nt +downstream
nt
atgtttcaagataacccgctattagcccaacttaagcagcaaatccaagaaaaccttcct
aaaaaagaagggtcaatcaaagcaacagataaaggctttggtttccttgaagtggacagc
aaaaccagtttcttcattccacctgcgtacatgaaaaagtgcattcatggcgataaagta
gtcgccattattcgtacagagaatgaacgtgaagttgcagagccacaagagctgctagaa
cagtcacttactcgctttattggccgtgtaaaaatgttcaaaggtaagctgaatgttgtt
cctgaccaccctcaactgaaaaagttgtcgctaaaagcaaaactaaagaaaggccaaaag
ccagataacttcaatgaaggtgattgggttgtcggccatcttattcgccaccctcttaaa
ggtgacaactctttcttcgtagaaatctctgaaaaaatcacggatgctgacgataagatc
gcaccatggtgggtaaccttggcacaaaacgatcttccaaactctgagcctgctggtatt
gagaactgggagttaaaagacgacgcggaattagaccgcgttgatttaactcacgttcca
ttcgtaactatcgatggcgagtccaccaaagatatggacgatgcgctgcatgcgaagaaa
acagaatctggcgattttgaactgaccatcgcgattgccgatcctaccgcatacattacg
ccagaagatgaaatggacaaagtcgctcgtgagcgtggctacacgatctacttgccaggg
cgcaacatcccaatgctgcctcgcgatcttgctgatgacctatgttctcttattgaaggt
gaaactcgccctgccctttgctgtaccgtaagcgtaagtaaagatggtgtgattggtgat
aacatcaacttctttgctgcgaacattaagtctcacgctcgtcttgcttatgaccacgta
tcagactggatcgaaaatggcagctctgataaatggcagccatcggaagatatcgcaact
atcgtacgtgacctgtacgacttctccgttgctcgtgccgactggcgtgaaaagaacgcg
gttgtattcccggaccgtccggactaccgtttcgaacttagcgaagacaatgacgttatt
gccattcatgcagacatgcgtcgcagtgcaaaccgtcttgtagaagagtcgatgatcaca
gcgaatatctgtgctggccgcacgcttcgcgataagtttgaaactggcgtgttcaacact
cactctggtctcaaagcagagaagattgaagaagttgtacaattagttgacccagaaggt
acacatggcttcacagcggacactatcgcgacactggaaggctttgcagcattacgtcgt
tggttgtctactcaggaaacttcatacttggataaccgcatccgcaagttccaggcgtac
agtgaagtcggcaatcagccacttcctcactacgcgatgggcctagatatttacgcgact
tggacatctccaattcgtaaatacggcgatatgatcaaccaccgtatgctaaaagcggtg
attcttgacaaagaacctgttcaaaagcctgatgatcaagtcggtgaagaactggcatta
caccgtaagcaccacaaaattgcggagcgtaatgtgtctgactggctttacgctcgtact
cttgctgaggagccaagcaaacaaactcgctacatcggtgaaattttcgatatcaatcgt
gctggtgcgcgtgttcgcctgcttgaaaacggcgccgcggcgtttattcctggctcactc
attgttgacaataaagaacgcattgagtgcaacggtgacaacggtactatctccatcgat
aaagaagtggtgtacaagctgggcgatacgctagaagttgtcttggcagatgtgaaccag
gaaaaccgcagtttagttgctaaaccgacgcaagtgttcgctgagccgccaaaagcacag
acggaacaaacggttgaataa
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