Vibrio natriegens: PN96_22185
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Entry
PN96_22185 CDS
T04636
Symbol
glyA
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
vna
Vibrio natriegens
Pathway
vna00260
Glycine, serine and threonine metabolism
vna00460
Cyanoamino acid metabolism
vna00630
Glyoxylate and dicarboxylate metabolism
vna00670
One carbon pool by folate
vna00680
Methane metabolism
vna01100
Metabolic pathways
vna01110
Biosynthesis of secondary metabolites
vna01120
Microbial metabolism in diverse environments
vna01200
Carbon metabolism
vna01230
Biosynthesis of amino acids
vna01240
Biosynthesis of cofactors
vna04981
Folate transport and metabolism
Module
vna_M00140
C1-unit interconversion, prokaryotes
Brite
KEGG Orthology (KO) [BR:
vna00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
PN96_22185 (glyA)
09102 Energy metabolism
00680 Methane metabolism
PN96_22185 (glyA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
PN96_22185 (glyA)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
PN96_22185 (glyA)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
PN96_22185 (glyA)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
PN96_22185 (glyA)
Enzymes [BR:
vna01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
PN96_22185 (glyA)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SHMT
Beta_elim_lyase
Aminotran_1_2
DegT_DnrJ_EryC1
Cys_Met_Meta_PP
OKR_DC_1
Motif
Other DBs
NCBI-ProteinID:
ALR18607
UniProt:
A0AAN0Y695
LinkDB
All DBs
Position
2:complement(1668305..1669567)
Genome browser
AA seq
420 aa
AA seq
DB search
MFNTTQNIEAYDSELWSAIVKEEQRQEDHIELIASENYTSPRVMQAQGSKLTNKYAEGYP
AKRYYGGCKFVDEVEVLAIERAKQLFGAEYANVQPHSGSQANAAVYMALCEPGDTVLGMS
LAHGGHLTHGSHVNFSGKIYNAVQYGLNAETGEIDYEQVEQLALEHKPKMIVAGFSAYSR
VVDWQRFRDIADKVGAYLFVDMAHVAGLVAAGVYPNPVPFADVVATTTHKTLRGPRGGLI
VSRDAELEKKINSAVFPGGQGGPLMHVIAAKAVAFKEALEPEFAEYQKQVVANAQVMAKV
FIERGFDVVSGGTDNHLFLLSLIRQKLTGKAADAALGMAGITVNKNAVPDDPQSPFVTSG
LRIGTPVITTRGFGEAECEMLAGWISDILDVLDDPQALASTIEVVGSKVQSLCRDFPAYQ
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atgtttaacactactcaaaacatcgaagcgtacgacagtgaactatggtcggcgattgta
aaagaagaacagagacaagaagaccacattgagctgattgcttctgaaaactacaccagc
ccacgagtgatgcaagctcaaggtagtaaactaaccaataaatacgctgagggttacccg
gcaaaaagatactacggtggctgtaaattcgttgatgaagtagaagtattggcgattgaa
cgtgcaaaacaactgttcggtgcggaatacgcgaacgtacaaccacactcagggtcacaa
gcaaacgctgccgtgtacatggctctttgtgaaccaggtgacacagtactaggcatgagc
cttgctcacggtggtcacttgactcacggttcgcacgttaacttttcaggcaaaatttac
aacgctgttcaatacggtctaaacgctgaaacgggcgagattgactacgaacaagttgaa
caactagctcttgagcacaagcctaaaatgatcgttgctggtttctcagcatactcacgt
gtcgttgactggcaacgcttccgcgatatcgcggacaaagttggcgcttaccttttcgtt
gatatggcgcacgtagcgggattagtggcagctggtgtttatccaaacccagtacctttc
gcggatgttgtagcaaccacaacacacaaaacgctacgcggtccacgcggtggtttgatt
gtttctcgcgacgctgaactagagaaaaagatcaactctgctgttttccctggtggtcag
ggtggtcctctaatgcacgtgattgcggcaaaagcagtagcgtttaaagaggcgttagag
ccagaattcgctgaataccagaaacaagttgtggcgaatgctcaggtaatggcgaaagta
tttatcgagcgtggtttcgacgttgtatcgggtggtacagacaaccacttattcctgttg
agcctaatccgtcagaagctgacaggtaaagcggcagacgcagcacttggcatggcgggt
atcaccgtaaacaaaaatgctgtaccggacgatccacaatctccattcgttacttcaggc
ctgcgcattggtacgccagtgattacaacgcgtggtttcggtgaagcggaatgtgaaatg
ctagcaggttggatctcagacattcttgatgtccttgatgacccgcaagcgctggcaagc
acgattgaagtcgtaggaagcaaagtgcagtcactatgccgtgatttccctgcataccaa
tag
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