Virgibacillus necropolis: CFK40_00825
Help
Entry
CFK40_00825 CDS
T04976
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
vne
Virgibacillus necropolis
Pathway
vne03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
vne00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
CFK40_00825
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vne03021
]
CFK40_00825
03400 DNA repair and recombination proteins [BR:
vne03400
]
CFK40_00825
Enzymes [BR:
vne01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
CFK40_00825
Transcription machinery [BR:
vne03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
CFK40_00825
DNA repair and recombination proteins [BR:
vne03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
CFK40_00825
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_5
DUF961
SAM_EPH
HTH_11
Dockerin_1
RAD51D_N
Motif
Other DBs
NCBI-ProteinID:
ASN03655
UniProt:
A0A221M7P3
LinkDB
All DBs
Position
complement(158705..159649)
Genome browser
AA seq
314 aa
AA seq
DB search
MIEIEKPKIETVEISDDANFGKFVVEPLERGYGTTLGNSLRRILLSSLPGAAVTAVQIDG
AQHEFSTIEGVVEDVTTIILNLKKLALKIYSDEEKTLEIDVQGEGKVTAADLTFDSDVEV
LNPELPIATINSKGSLHMRITAERGRGYRPAEGNNHDDQPIGVIPVDSIFTPVSRVTFQV
ENTRVGQIANFDKLTLDVWTDGSIRPEEAVSLGAKIFTEHLNIFVGLTDEAQNAEIMVEK
EEDQKEKVMEMTIEELDLSVRSYNCLKRAGINTVQELANKSEEDMMKVRNLGRKSLVEVK
VKLEDLGLGLRNDD
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atgatcgaaattgaaaaaccaaaaatagaaacagtagagatcagcgatgatgccaatttt
ggtaaattcgtcgtcgaaccgcttgaacgtggatatggtactactctaggaaactccttg
cgtcgtatcctactatcctcacttccaggtgctgctgtaacagcagttcaaatcgatgga
gcgcaacatgagttttcaacgattgaaggtgttgtagaagatgtaacaacaatcatctta
aatctaaagaaacttgctcttaaaatctactctgatgaagaaaaaacactagagattgat
gtgcaaggggaaggaaaagttacggctgcagatcttacctttgatagtgatgtagaagta
ttgaatccggaacttccaattgcgacgattaatagcaaaggaagcttgcatatgagaata
actgctgaacgtggtcgcggttatcgccctgctgagggaaataatcatgatgatcaacca
ataggcgttatcccagttgactctattttcacaccagtatcacgcgtgactttccaagtt
gaaaatactcgtgtcggacaaattgcgaatttcgataagttaacattagatgtgtggaca
gatggaagcattcgtcctgaagaagcagtttcgttaggtgccaaaatatttacagaacat
cttaatatttttgtgggcttaacagacgaagcacaaaatgcagaaataatggtagaaaaa
gaagaagaccaaaaagaaaaagtaatggaaatgacaatcgaagaattagatctttctgtc
agatcctataattgtttaaaacgtgctggtattaatacagttcaagaacttgcaaataaa
tctgaagaagatatgatgaaggttcgtaatttaggccgtaaatctcttgttgaagttaaa
gtaaaacttgaagatcttggcttaggtttacgtaacgatgactga
DBGET
integrated database retrieval system
