Virgibacillus necropolis: CFK40_01090
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Entry
CFK40_01090 CDS
T04976
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
vne
Virgibacillus necropolis
Brite
KEGG Orthology (KO) [BR:
vne00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vne03400
]
CFK40_01090
DNA repair and recombination proteins [BR:
vne03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
CFK40_01090
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
Zn_ribbon_LapB
ChlI
DnaB_C
Lon_C
Rad51
AAA
AAA_22
nSTAND_NTPase5
DUF7125
nSTAND3
AAA_16
NTPase_1
AAA_14
NACHT
GvpD_P-loop
ATPase_2
NPHP3_N
KTI12
SLFN-g3_helicase
AAA_24
TIP49
ABC_tran
AAA_5
Glyco_transf_N
Isochorismatase
AAA_30
DAP3
HypA
DUF7129
zf-RING_10
Motif
Other DBs
NCBI-ProteinID:
ASN03706
UniProt:
A0A221M7S8
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All DBs
Position
complement(199271..200644)
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AA seq
457 aa
AA seq
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MAKRKVKYVCQECGYESAKWMGKCPGCNNWNTLVEEIESSSKNNRHASGTIANTQSKPQK
ITTIESDKEPRITTQMKEFNRVLGGGVVPGSLVLIGGDPGIGKSTLLLQISSQLADKKLP
VLYISGEESAKQTKLRADRLAIKSDLLYVLAETNLYDISNQISELKPSFVVIDSIQTIFR
EEITSAPGSVSQVRECTSELMKIAKSNGIPIFIVGHVTKEGSIAGPRILEHMVDAVLYFE
GERHHTFRILRGVKNRFGSTNEMGIFEMKEEGLVEVMNPSEIFLEERSRGAAGSTIVASM
EGTRPVLVEIQALISPSSFGNPRRMATGFDNNRVPLLMAVLEKRVGLMLQNQDAYVKVAG
GVKLDEPAIDLAIAVSIASSFRDQPTKPDDIFVGEVGLTGEIRRVSRIEQRVQEAAKLGF
KRVICPKKNLGGWTPPSSIQVIGVNSVQEALNVGVSK
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
ttggcaaaacgtaaagttaaatatgtatgccaggaatgtggctatgagtctgccaaatgg
atggggaaatgcccaggatgcaacaattggaatactttagtagaggaaattgagtcatca
agtaaaaacaatcgtcatgctagtggaaccattgctaatacgcaaagcaaaccacagaaa
ataacaacaatagaatcagataaagagccacgaattacaacgcaaatgaaagagtttaat
cgagttctcggtggcggggtagtacctggatcgcttgtgttaataggtggtgacccaggt
ataggcaaatctacattactattacaaatatcatctcaactagccgacaagaaattacca
gtactctatatttctggtgaggaatccgccaaacaaacgaagcttcgtgcggatcgttta
gcgattaaatcggatttgttgtatgtccttgcagaaacaaatttatatgatatatcgaat
caaatttctgagttaaaaccatcgtttgtcgttattgattcaatccaaacgatatttaga
gaagaaataacgagtgcccctggtagtgtatcccaagtacgtgaatgcactagtgagtta
atgaaaattgctaagtcaaatggcatcccaatatttatcgttggtcatgtaaccaaggaa
ggttcgattgcagggccgcgtatactcgaacatatggttgatgctgttctatactttgaa
ggagaacgtcaccatacatttagaatattgcgcggagtaaagaaccgctttggaagtacc
aatgaaatgggtatttttgaaatgaaggaagaaggtcttgtagaagtcatgaatccttct
gaaattttccttgaggaacgatcgcgtggtgctgctggctcaacaattgttgcgtcaatg
gaaggaacaagaccagtacttgtcgaaatacaagcattaatttcgccatcaagttttggt
aatccaaggcgaatggcaactggctttgataacaatcgggtaccattactgatggccgta
cttgaaaaacgggtagggcttatgctgcaaaatcaggatgcttacgtgaaagttgctggt
ggagtaaagctagacgagcctgctattgatttagcgatagcggtaagtatagcatcaagc
tttcgtgatcaacccacaaaaccagatgatattttcgttggagaagttggcttaactggg
gaaataagacgtgtctcccgaattgagcaaagggttcaggaagcggccaagcttgggttt
aagcgggttatctgtccaaagaaaaatttaggtggatggacaccgccaagctctattcag
gttataggcgtgaatagtgtccaggaagcattaaatgttggtgtttccaagtaa
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