Virgibacillus necropolis: CFK40_03120
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Entry
CFK40_03120 CDS
T04976
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
vne
Virgibacillus necropolis
Pathway
vne00260
Glycine, serine and threonine metabolism
vne00460
Cyanoamino acid metabolism
vne00630
Glyoxylate and dicarboxylate metabolism
vne00670
One carbon pool by folate
vne00680
Methane metabolism
vne01100
Metabolic pathways
vne01110
Biosynthesis of secondary metabolites
vne01120
Microbial metabolism in diverse environments
vne01200
Carbon metabolism
vne01230
Biosynthesis of amino acids
vne01240
Biosynthesis of cofactors
vne04981
Folate transport and metabolism
Module
vne_M00140
C1-unit interconversion, prokaryotes
Brite
KEGG Orthology (KO) [BR:
vne00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
CFK40_03120
09102 Energy metabolism
00680 Methane metabolism
CFK40_03120
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
CFK40_03120
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
CFK40_03120
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
CFK40_03120
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
CFK40_03120
Enzymes [BR:
vne01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
CFK40_03120
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
Aminotran_5
OKR_DC_1
DegT_DnrJ_EryC1
ATP-synt_F
Harpin
Motif
Other DBs
NCBI-ProteinID:
ASN04062
UniProt:
A0A221M8V8
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All DBs
Position
630697..631932
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AA seq
411 aa
AA seq
DB search
MEHVKKGDQELYQAIQNEKKRQHDKIELIASENFVSEAVMEAMGSVLTNKYAEGYPGKRY
YGGCEHVDVVENLARDRAKQLFGAEHVNVQPHSGAQANMAVYFTVLEPGDTVLGMNLNHG
GHLTHGSPVNFSGTLYNFVDYGVEKETEQLDYGVVLKKAQEVKPKLIVAGASAYSRHIDF
AKFREIADTVGAYLMVDMAHIAGLVAAGLHQSPVEHADFVTTTTHKTLRGPRGGMILCKE
EFAKKIDKTVFPGMQGGPLMHIIAAKATSFKEALTDDFKTYSKQIIENAKLLGDALVREG
VRIVSGGTDNHLLLLDVKTLGLTGKVAEKVLDDIGITTNKNTIPFDAESPFVTSGIRIGT
AAVTTRGFGKDEMEEIASIISFTLKNHEDEAALKEAADRVYALTNKHPLYA
NT seq
1236 nt
NT seq
+upstream
nt +downstream
nt
atggaacatgtaaaaaagggagatcaggagttataccaagcaatacaaaatgaaaaaaaa
cgtcaacatgacaaaatcgaattaattgcatctgaaaactttgtctcagaagcggtaatg
gaagcaatgggatctgttttaacgaataaatatgcagagggctatcctggtaaacgctat
tatggtggctgtgagcatgttgatgtagtggaaaacttagcacgtgatcgggcaaaacag
ttatttggagcagagcatgtgaacgtgcaaccacattctggggcacaagctaatatggca
gtatattttactgtattagagcctggtgacacagttcttggcatgaacctaaatcatggt
ggacatttaacgcacggtagcccggtgaattttagtggtacactttataactttgttgat
tatggcgttgaaaaagaaacagaacagctagattacggtgttgtattgaaaaaagcgcag
gaagtaaaaccgaagctaattgttgcaggtgctagtgcatattctcgtcatatcgatttt
gcaaagttccgtgaaatcgctgatacagttggtgcttatttaatggttgacatggcacac
atcgctggtttagtagctgctggtttacaccaaagcccagtagaacacgcagattttgta
actacaacaacacataaaacacttcgcggaccacgtggcggtatgattttatgtaaagaa
gagtttgcgaaaaagattgataaaaccgtattccctggaatgcagggtggaccgttgatg
catataattgctgcaaaagctacgtcatttaaggaagcgctgacagatgattttaaaacg
tattctaaacagattattgaaaatgcaaaattgttaggtgatgcattggtgcgtgaagga
gttcgcatcgtttcaggtgggaccgataatcatttattacttttagatgtgaaaacactt
ggactaacaggtaaagtagctgaaaaagtactagacgatatcggaatcacaacaaataaa
aatacaatcccatttgatgcggaaagtccgtttgtaacaagcggcattcgtattggtaca
gctgcagtaacaacgcgtggatttggtaaagatgaaatggaagaaatcgcatcgattatt
tcatttacattgaaaaatcatgaagacgaagcagcattaaaagaagcggcagaccgtgtt
tatgcattaacaaataaacatccgctttatgcataa
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