Virgibacillus necropolis: CFK40_07900
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Entry
CFK40_07900 CDS
T04976
Name
(GenBank) 16S rRNA pseudouridine(516) synthase
KO
K06183
16S rRNA pseudouridine516 synthase [EC:
5.4.99.19
]
Organism
vne
Virgibacillus necropolis
Brite
KEGG Orthology (KO) [BR:
vne00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
vne03009
]
CFK40_07900
Enzymes [BR:
vne01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.19 16S rRNA pseudouridine516 synthase
CFK40_07900
Ribosome biogenesis [BR:
vne03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
CFK40_07900
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-ProteinID:
ASN04938
UniProt:
A0A221MB82
LinkDB
All DBs
Position
1699071..1699787
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AA seq
238 aa
AA seq
DB search
MRLDKLLANMGYGSRKDVKNILKLKMVSVNNAIIKDGKVHVDTSMDVIQVGEDTVHYQKY
IYLMMNKPPGYISATVDHTEKTVIDLLSSGHQNFQPFPVGRLDKDTEGLLLLTNDGEFGH
QLTSPKKDVTKVYYAKIDGHVSDEDIERFSKGLTLEDGYQTKPAKLRILVAGKHSEIEVS
ITEGKYHQVKRMFAAVGKKVTYLKRIKMGLLVLDPSLKKGNYRELTEDELTSISQKNS
NT seq
717 nt
NT seq
+upstream
nt +downstream
nt
atgcgtcttgataaactgttagcaaatatggggtatggaagtcggaaggatgtaaaaaat
atacttaaactgaaaatggtttccgtaaataacgctattataaaagacggaaaagtgcat
gtagatacttcaatggacgttattcaggtgggggaagatacggttcattatcagaaatat
atttacttaatgatgaataaacctccaggatatatatctgctacagtcgatcatacagaa
aaaacggtgattgatttgttatcatctggccatcaaaactttcaaccatttccggttgga
agattagataaggatacagagggattgcttttacttacaaatgacggggaatttggacat
cagctaacgtcaccaaagaaagacgttactaaagtctactatgctaaaattgatggacat
gtatcagatgaagatattgaacgattttctaaaggtctaacacttgaggatgggtatcaa
acgaaaccagcaaaactccgcattcttgttgctggaaaacattctgaaattgaagttagt
attacagagggtaaatatcaccaagttaaaaggatgtttgcagcagtgggtaaaaaggta
acctatttaaaacgaataaagatgggactacttgtattggacccatccctaaaaaaagga
aactatagggagcttacagaagacgaattgacgtcaatttctcaaaaaaacagctga
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