KEGG   Virgibacillus necropolis: CFK40_07970
Entry
CFK40_07970       CDS       T04976                                 
Name
(GenBank) Ku protein
  KO
K10979  DNA end-binding protein Ku
Organism
vne  Virgibacillus necropolis
Pathway
vne03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:vne00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03450 Non-homologous end-joining
    CFK40_07970
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:vne03400]
    CFK40_07970
DNA repair and recombination proteins [BR:vne03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Two-component NHEJ DNA repair complex
     CFK40_07970
SSDB
Motif
Pfam: Ku CDC24_OB3
Other DBs
NCBI-ProteinID: ASN04952
UniProt: A0A221MBG7
LinkDB
Position
complement(1710019..1710864)
AA seq 281 aa
MHTMWKGTISFGLVNIPVKMHAATENKDIKLRQLHKECQSPIKYERTCPNCDREVKNDEI
VKAYEYGKDKFVILDEEDLEALKKEQADKAVEIVDFVKLEEIDPIYFEKSYFLSPNEGGG
KAYGLLRSALKDTSKIGIAKMIIRSKEQLAVIRVYENTLIVETIHYPDEVRQVKDVPNIP
EESNTAKKELDTAKMLIEQLTTTFEPEKYNDDYRTALLELIEAKKNNEDVVIGENKPSTT
DDNVTNLMDALEASLDKAKKNKPKPKPAKPKTTKSKKKVAK
NT seq 846 nt   +upstreamnt  +downstreamnt
atgcatacgatgtggaaaggcaccatcagttttggacttgtaaatatcccagtaaagatg
cacgctgcaactgaaaataaagatattaagctaagacagctgcataaagagtgtcagtcc
cctattaaatatgaacgtacatgtcccaattgcgatcgtgaagtaaaaaatgatgaaatc
gtcaaagcatatgaatatggaaaagataaatttgtcattttagatgaagaagatttagaa
gcgttgaaaaaagagcaagcagacaaagcggtcgaaattgttgactttgttaaactagaa
gaaattgatccgatttattttgaaaaaagttattttttatcccctaacgagggtgggggg
aaggcatatggattattgcgttctgccttaaaagacacatctaaaatcggaattgcaaaa
atgatcattagatctaaagaacagctagcagttatacgcgtttatgaaaatacgctaatt
gttgaaaccattcattacccagatgaagtaagacaagttaaagacgttcctaatatacca
gaagaatcaaatacagcaaagaaagagttagatacagccaaaatgcttatcgaacaactt
acaactacattcgaacctgaaaagtataatgacgattaccgaactgccttacttgagtta
attgaagccaagaaaaataatgaagatgtcgtaattggtgaaaataaaccaagtacgaca
gatgacaatgttacgaatttgatggacgcattagaagcttccctcgacaaagcaaagaaa
aacaaaccaaaaccaaagccagccaaaccaaaaaccaccaaatcaaagaaaaaagtagca
aagtaa

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