Virgibacillus necropolis: CFK40_08375
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Entry
CFK40_08375 CDS
T04976
Symbol
mutM
Name
(GenBank) DNA-formamidopyrimidine glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
vne
Virgibacillus necropolis
Pathway
vne03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
vne00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CFK40_08375 (mutM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vne03400
]
CFK40_08375 (mutM)
Enzymes [BR:
vne01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
CFK40_08375 (mutM)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
CFK40_08375 (mutM)
DNA repair and recombination proteins [BR:
vne03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
CFK40_08375 (mutM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
NFACT_N
C_Hendra
Auto_anti-p27
Motif
Other DBs
NCBI-ProteinID:
ASN05026
UniProt:
A0A221MBH8
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All DBs
Position
1798804..1799628
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AA seq
274 aa
AA seq
DB search
MPELPEVETVKQTLKRLVQNKTIQGVEVFWPNIIKLPDDVEEFKINLQQQTILDIHRKGK
FLLFELSDYMLISHLRMEGKYSVHENGEPVKKHTHVIFTFTDGDELRYNDVRKFGTMHIV
NKGTELDQKPLNQLGPDPFDAAFTFDYFYKKLHKTDRVIKAALLDQSIVAGLGNIYVDET
LFQAKVNPLKKSNKLTKKEVKSIQEEAKTILQHAIELGGTTIRSYVNSSGEMGMFQQTLY
VYGQENNPCRTCGRPIVKMKIGGRGTHVCMNCQK
NT seq
825 nt
NT seq
+upstream
nt +downstream
nt
atgccagaattaccagaagtagaaacagtaaaacaaacattaaaacgacttgttcaaaat
aaaaccattcaaggtgtggaagtattttggcctaatattataaaactgcctgatgatgtt
gaagaatttaaaattaatttacaacaacaaacgatcctagatatacatcgtaagggcaaa
tttttattatttgaattaagtgattatatgttaatttcgcatcttcgcatggaaggtaaa
tacagtgtgcacgaaaacggtgaacctgtgaagaaacatacacatgtaattttcactttt
acagatggtgatgaattacgctataacgatgtccgtaagtttgggacgatgcatattgtg
aataaaggcacggagctagatcaaaagccattaaatcaactaggtccagatccgtttgac
gcagcatttacatttgattacttttataaaaagcttcataaaacagatcgcgtgataaag
gctgcgttattggatcaatcaatagtcgcaggacttggaaacatttatgtagatgagacg
ttatttcaagctaaagtgaacccattgaaaaaatcgaataaacttaccaaaaaagaagtg
aagtcaattcaagaggaagctaaaacaattcttcaacacgcgatagaattaggtggaacc
accatacgctcctatgtaaacagtagtggtgaaatggggatgttccagcaaacattatat
gtatatggacaagaaaataacccatgcagaacttgcggaaggccaatagtcaaaatgaaa
attggcggtcgcggtacacatgtgtgtatgaattgtcaaaaatag
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