Virgibacillus necropolis: CFK40_09170
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Entry
CFK40_09170 CDS
T04976
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
vne
Virgibacillus necropolis
Pathway
vne03030
DNA replication
vne03430
Mismatch repair
vne03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
vne00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CFK40_09170
03430 Mismatch repair
CFK40_09170
03440 Homologous recombination
CFK40_09170
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vne03032
]
CFK40_09170
03400 DNA repair and recombination proteins [BR:
vne03400
]
CFK40_09170
Enzymes [BR:
vne01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CFK40_09170
DNA replication proteins [BR:
vne03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CFK40_09170
DNA repair and recombination proteins [BR:
vne03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CFK40_09170
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta_C
DNA_pol3_delta
DNA_pol3_gamma3
HTH_3
Motif
Other DBs
NCBI-ProteinID:
ASN05174
UniProt:
A0A221MC08
LinkDB
All DBs
Position
1957936..1958982
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AA seq
348 aa
AA seq
DB search
MSYLEIAQKIKKNQLAPTYLLYGTESYFIQDIKKQLTNAILPDGDIENLSTYDLDETPIQ
EVISDTETYPLFGERKLIIAHNPSFLKAKPSKLPFEHDLDRLQFYIENPVDYATIIFIAE
YEKIDERKKVTKVIKKNAAIAKCDPIKEHELSKWIKTIANDYHITIEPKAFDVIETELQA
NLHLLQNEMMKFALYVGEGGNLTKDDAEMLISHTLNNSSLRLVDAVIERDIRKAITIYRD
LLKMKEEPIAMVALLAYQFRTLLRVKLLKQKGYSQAQIQKQLGIHPFVVKIALSRESKFT
IEQLSSYIDKLTNADADMKQGRMEKELAFDLLLYDLTNSRSQVTKSSI
NT seq
1047 nt
NT seq
+upstream
nt +downstream
nt
atgtcttatcttgaaatagcacaaaaaataaaaaaaaatcaactggcaccaacctatttg
ttatatggaacagaatcgtattttatacaggatataaagaagcagttaacaaatgcaatt
ttacctgatggggatattgaaaatttatctacatatgatctagatgaaactcctattcaa
gaggttatttctgacacggaaacctatccgttatttggagaaagaaaattaattattgcc
cataacccttcttttttaaaggcaaagccaagtaaattgccattcgaacatgatctagac
cggttacagttctatatagaaaaccctgttgattatgcaacgattatttttatagctgaa
tatgaaaaaattgatgaacggaaaaaagtaacaaaagtaatcaaaaaaaatgctgccatt
gccaaatgcgatcccatcaaagaacacgagctgtcgaagtggattaaaacaattgctaat
gactatcatataacaattgaacctaaagcttttgatgttattgaaacagagctacaagca
aatcttcatctattacagaatgagatgatgaagttcgcattgtatgttggagaaggtggt
aatctaacgaaagatgatgcagaaatgcttatatctcatacattaaacaattcgtcttta
cgattggtagacgctgttatagaacgggatatacgtaaagcaatcactatttaccgggat
ctactgaaaatgaaagaagaaccaattgctatggttgcacttttagcctatcaatttcgt
accttattgcgtgttaaacttttaaagcaaaaagggtacagtcaagcccagatacagaaa
caacttggaattcacccgtttgttgttaaaattgctttatctagagaaagtaaatttacc
attgagcaattatcatcatatatcgataaattaacgaatgccgatgcagatatgaaacaa
ggtaggatggagaaagaacttgcatttgatttattactatatgatttaaccaattcaaga
agccaagtgactaaaagcagtatatag
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