KEGG   Virgibacillus necropolis: CFK40_10010
Entry
CFK40_10010       CDS       T04976                                 
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
vne  Virgibacillus necropolis
Pathway
vne00010  Glycolysis / Gluconeogenesis
vne00020  Citrate cycle (TCA cycle)
vne00260  Glycine, serine and threonine metabolism
vne00280  Valine, leucine and isoleucine degradation
vne00310  Lysine degradation
vne00380  Tryptophan metabolism
vne00620  Pyruvate metabolism
vne00630  Glyoxylate and dicarboxylate metabolism
vne00640  Propanoate metabolism
vne00670  One carbon pool by folate
vne00785  Lipoic acid metabolism
vne01100  Metabolic pathways
vne01110  Biosynthesis of secondary metabolites
vne01120  Microbial metabolism in diverse environments
vne01200  Carbon metabolism
vne01210  2-Oxocarboxylic acid metabolism
vne01240  Biosynthesis of cofactors
Module
vne_M00009  Citrate cycle (TCA cycle, Krebs cycle)
vne_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
vne_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
vne_M00621  Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:vne00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    CFK40_10010 (lpdA)
   00020 Citrate cycle (TCA cycle)
    CFK40_10010 (lpdA)
   00620 Pyruvate metabolism
    CFK40_10010 (lpdA)
   00630 Glyoxylate and dicarboxylate metabolism
    CFK40_10010 (lpdA)
   00640 Propanoate metabolism
    CFK40_10010 (lpdA)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    CFK40_10010 (lpdA)
   00280 Valine, leucine and isoleucine degradation
    CFK40_10010 (lpdA)
   00310 Lysine degradation
    CFK40_10010 (lpdA)
   00380 Tryptophan metabolism
    CFK40_10010 (lpdA)
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    CFK40_10010 (lpdA)
   00670 One carbon pool by folate
    CFK40_10010 (lpdA)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:vne04147]
    CFK40_10010 (lpdA)
Enzymes [BR:vne01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     CFK40_10010 (lpdA)
Exosome [BR:vne04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   CFK40_10010 (lpdA)
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Pyr_redox FAD_oxidored 3HCDH_N GIDA DAO Pyr_redox_3 AlaDh_PNT_C FAD_binding_2 NAD_binding_8 FAD_binding_3 HI0933_like Lys_Orn_oxgnase Thi4 2-Hacid_dh_C Trp_halogenase NAD_binding_7 Propeptide_C25
Other DBs
NCBI-ProteinID: ASN05323
UniProt: A0A221MCF4
LinkDB
Position
2109792..2111213
AA seq 473 aa
MAKEYDLVVLGGGTGGYVAAIRASQLGLQVAIVEKGDLGGTCLHRGCIPSKALLRSAEVL
KQTKEASQYGIDTKDTTLNFTKVQERKDSIVSTLHQGVQGLMKKGEIDVFEGFGRILGPS
IFSPMPGTISIEYANGDENTMIVPKNVLIATGSKPKSLPGLEIDGTNVMTSDEALQMEEL
PKSIIIVGGGVIGIEWASMLADFGVEVTVVEYLDQILPTEDDAIAKEVEKLLKKKTITFV
KGAKVLADTLSSENGITIEAEVNGKNESFQADKMLVSVGREANTSNIGLENTDIVVEKGF
IQTNEFFQTKETHIYAIGDVIGGMQLAHVASHEGIVAVEHMTDKDPLPLDYENIPTCIYS
NPEVASVGLTEKQAKEKGFDIKVGKFPFKAIGKALVHGDSEGFVKVIADKKTDDLLGCHM
IGPHVTDMISEAGLAKVLDATPWEIAHSIHPHPTLAEVMGEAALAVDGKQIHG
NT seq 1422 nt   +upstreamnt  +downstreamnt
atggcaaaagaatatgatcttgtcgtcctcggtggaggaacaggaggatatgtcgctgca
atccgagcttcacagctcggattacaggttgcaattgtagagaaaggcgacctcggggga
acatgtttacatcgtggttgtataccttcaaaagcattgctgcgcagtgcagaagtttta
aaacaaaccaaagaagctagccaatatggtatcgatacaaaagatacaacattaaatttt
acaaaagtacaagaaagaaaagatagtattgtaagtacgttacaccaaggtgttcaagga
cttatgaaaaaaggggaaattgacgtctttgaagggtttggacgtatattaggaccaagc
atcttttcaccaatgccaggaacaatttcaatcgagtatgcaaatggtgatgaaaataca
atgattgtacctaaaaatgtattaattgcaactggttccaaaccaaagtctcttccaggt
cttgaaattgatggaacaaatgtcatgacatctgatgaagcacttcaaatggaagaattg
ccaaagtcaatcattattgttggtggtggtgtaatcggaattgagtgggcgtctatgctt
gcggattttggtgtagaagtaacagttgttgaatacttagatcaaattttgcctacagaa
gatgatgcaattgccaaagaggttgaaaaacttctgaaaaagaaaactattacttttgtg
aaaggcgctaaggttttagctgatacattatctagtgaaaatggtattactattgaggct
gaagttaacggcaagaacgaaagcttccaagcggataaaatgttagtttcagttggacgt
gaagctaatacgtctaacattgggcttgaaaacacagacatagttgtcgaaaaaggcttt
attcaaacaaatgagtttttccaaacgaaagaaacgcacatttatgcaatcggcgatgtt
attggcggaatgcagctagcccacgtcgcttcacatgaaggaattgtagctgtagaacat
atgactgataaagatccattaccacttgactatgaaaacataccaacttgtatttattca
aaccctgaagttgctagtgtcggtctaactgaaaaacaagcaaaagaaaaagggtttgat
attaaggtaggcaagtttccttttaaagcaattggtaaagcacttgttcacggtgattca
gaaggttttgttaaagttatcgcggataagaaaacagatgatttattaggctgtcatatg
attggaccacatgttacggatatgatctctgaagctggacttgcaaaagtattggatgca
acaccttgggaaattgcgcatagcattcatccacatccaacccttgcagaagtaatgggt
gaagcagcattagctgttgatgggaaacagatacacggttaa

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