Virgibacillus necropolis: CFK40_10010
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Entry
CFK40_10010 CDS
T04976
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
KO
K00382
dihydrolipoyl dehydrogenase [EC:
1.8.1.4
]
Organism
vne
Virgibacillus necropolis
Pathway
vne00010
Glycolysis / Gluconeogenesis
vne00020
Citrate cycle (TCA cycle)
vne00260
Glycine, serine and threonine metabolism
vne00280
Valine, leucine and isoleucine degradation
vne00310
Lysine degradation
vne00380
Tryptophan metabolism
vne00620
Pyruvate metabolism
vne00630
Glyoxylate and dicarboxylate metabolism
vne00640
Propanoate metabolism
vne00670
One carbon pool by folate
vne00785
Lipoic acid metabolism
vne01100
Metabolic pathways
vne01110
Biosynthesis of secondary metabolites
vne01120
Microbial metabolism in diverse environments
vne01200
Carbon metabolism
vne01210
2-Oxocarboxylic acid metabolism
vne01240
Biosynthesis of cofactors
Module
vne_M00009
Citrate cycle (TCA cycle, Krebs cycle)
vne_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
vne_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
vne_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
vne00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
CFK40_10010 (lpdA)
00020 Citrate cycle (TCA cycle)
CFK40_10010 (lpdA)
00620 Pyruvate metabolism
CFK40_10010 (lpdA)
00630 Glyoxylate and dicarboxylate metabolism
CFK40_10010 (lpdA)
00640 Propanoate metabolism
CFK40_10010 (lpdA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
CFK40_10010 (lpdA)
00280 Valine, leucine and isoleucine degradation
CFK40_10010 (lpdA)
00310 Lysine degradation
CFK40_10010 (lpdA)
00380 Tryptophan metabolism
CFK40_10010 (lpdA)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
CFK40_10010 (lpdA)
00670 One carbon pool by folate
CFK40_10010 (lpdA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
vne04147
]
CFK40_10010 (lpdA)
Enzymes [BR:
vne01000
]
1. Oxidoreductases
1.8 Acting on a sulfur group of donors
1.8.1 With NAD+ or NADP+ as acceptor
1.8.1.4 dihydrolipoyl dehydrogenase
CFK40_10010 (lpdA)
Exosome [BR:
vne04147
]
Exosomal proteins
Exosomal proteins of breast cancer cells
CFK40_10010 (lpdA)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pyr_redox_2
Pyr_redox_dim
Pyr_redox
FAD_oxidored
3HCDH_N
GIDA
DAO
Pyr_redox_3
AlaDh_PNT_C
FAD_binding_2
NAD_binding_8
FAD_binding_3
HI0933_like
Lys_Orn_oxgnase
Thi4
2-Hacid_dh_C
Trp_halogenase
NAD_binding_7
Propeptide_C25
Motif
Other DBs
NCBI-ProteinID:
ASN05323
UniProt:
A0A221MCF4
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All DBs
Position
2109792..2111213
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AA seq
473 aa
AA seq
DB search
MAKEYDLVVLGGGTGGYVAAIRASQLGLQVAIVEKGDLGGTCLHRGCIPSKALLRSAEVL
KQTKEASQYGIDTKDTTLNFTKVQERKDSIVSTLHQGVQGLMKKGEIDVFEGFGRILGPS
IFSPMPGTISIEYANGDENTMIVPKNVLIATGSKPKSLPGLEIDGTNVMTSDEALQMEEL
PKSIIIVGGGVIGIEWASMLADFGVEVTVVEYLDQILPTEDDAIAKEVEKLLKKKTITFV
KGAKVLADTLSSENGITIEAEVNGKNESFQADKMLVSVGREANTSNIGLENTDIVVEKGF
IQTNEFFQTKETHIYAIGDVIGGMQLAHVASHEGIVAVEHMTDKDPLPLDYENIPTCIYS
NPEVASVGLTEKQAKEKGFDIKVGKFPFKAIGKALVHGDSEGFVKVIADKKTDDLLGCHM
IGPHVTDMISEAGLAKVLDATPWEIAHSIHPHPTLAEVMGEAALAVDGKQIHG
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaagaatatgatcttgtcgtcctcggtggaggaacaggaggatatgtcgctgca
atccgagcttcacagctcggattacaggttgcaattgtagagaaaggcgacctcggggga
acatgtttacatcgtggttgtataccttcaaaagcattgctgcgcagtgcagaagtttta
aaacaaaccaaagaagctagccaatatggtatcgatacaaaagatacaacattaaatttt
acaaaagtacaagaaagaaaagatagtattgtaagtacgttacaccaaggtgttcaagga
cttatgaaaaaaggggaaattgacgtctttgaagggtttggacgtatattaggaccaagc
atcttttcaccaatgccaggaacaatttcaatcgagtatgcaaatggtgatgaaaataca
atgattgtacctaaaaatgtattaattgcaactggttccaaaccaaagtctcttccaggt
cttgaaattgatggaacaaatgtcatgacatctgatgaagcacttcaaatggaagaattg
ccaaagtcaatcattattgttggtggtggtgtaatcggaattgagtgggcgtctatgctt
gcggattttggtgtagaagtaacagttgttgaatacttagatcaaattttgcctacagaa
gatgatgcaattgccaaagaggttgaaaaacttctgaaaaagaaaactattacttttgtg
aaaggcgctaaggttttagctgatacattatctagtgaaaatggtattactattgaggct
gaagttaacggcaagaacgaaagcttccaagcggataaaatgttagtttcagttggacgt
gaagctaatacgtctaacattgggcttgaaaacacagacatagttgtcgaaaaaggcttt
attcaaacaaatgagtttttccaaacgaaagaaacgcacatttatgcaatcggcgatgtt
attggcggaatgcagctagcccacgtcgcttcacatgaaggaattgtagctgtagaacat
atgactgataaagatccattaccacttgactatgaaaacataccaacttgtatttattca
aaccctgaagttgctagtgtcggtctaactgaaaaacaagcaaaagaaaaagggtttgat
attaaggtaggcaagtttccttttaaagcaattggtaaagcacttgttcacggtgattca
gaaggttttgttaaagttatcgcggataagaaaacagatgatttattaggctgtcatatg
attggaccacatgttacggatatgatctctgaagctggacttgcaaaagtattggatgca
acaccttgggaaattgcgcatagcattcatccacatccaacccttgcagaagtaatgggt
gaagcagcattagctgttgatgggaaacagatacacggttaa
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